Protein–RNA interactions for Protein: P35609

ACTN2, Alpha-actinin-2, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN2P35609 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.31■□□□□ 0.84
ACTN2P35609 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.31■□□□□ 0.84
ACTN2P35609 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ACTN2P35609 GCSHP5-201ENST00000443090 522 ntBASIC20.31■□□□□ 0.84
ACTN2P35609 AC098590.1-201ENST00000468126 897 ntBASIC20.31■□□□□ 0.84
ACTN2P35609 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
ACTN2P35609 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.31■□□□□ 0.84
ACTN2P35609 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.31■□□□□ 0.84
ACTN2P35609 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.31■□□□□ 0.84
ACTN2P35609 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.31■□□□□ 0.84
ACTN2P35609 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN2P35609 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ACTN2P35609 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
ACTN2P35609 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN2P35609 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.31■□□□□ 0.84
ACTN2P35609 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN2P35609 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN2P35609 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ACTN2P35609 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ACTN2P35609 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
ACTN2P35609 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ACTN2P35609 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.3■□□□□ 0.84
ACTN2P35609 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.3■□□□□ 0.84
ACTN2P35609 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 AC012313.1-201ENST00000593393 3059 ntBASIC20.3■□□□□ 0.84
ACTN2P35609 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 ESRRAP1-201ENST00000400596 1257 ntBASIC20.3■□□□□ 0.84
ACTN2P35609 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ACTN2P35609 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.3■□□□□ 0.84
ACTN2P35609 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.3■□□□□ 0.84
ACTN2P35609 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.3■□□□□ 0.84
ACTN2P35609 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.3■□□□□ 0.84
ACTN2P35609 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.3■□□□□ 0.84
ACTN2P35609 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 AC106820.2-201ENST00000563775 3264 ntBASIC20.3■□□□□ 0.84
ACTN2P35609 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ACTN2P35609 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.3■□□□□ 0.84
ACTN2P35609 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ACTN2P35609 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN2P35609 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN2P35609 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN2P35609 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN2P35609 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN2P35609 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN2P35609 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ACTN2P35609 KRT17P1-201ENST00000399211 1546 ntBASIC20.29■□□□□ 0.84
ACTN2P35609 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN2P35609 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN2P35609 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN2P35609 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.29■□□□□ 0.84
ACTN2P35609 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ACTN2P35609 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN2P35609 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.29■□□□□ 0.84
ACTN2P35609 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN2P35609 AC093787.1-201ENST00000450396 207 ntBASIC20.29■□□□□ 0.84
ACTN2P35609 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN2P35609 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.29■□□□□ 0.84
ACTN2P35609 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN2P35609 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.29■□□□□ 0.84
ACTN2P35609 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN2P35609 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.29■□□□□ 0.84
ACTN2P35609 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN2P35609 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN2P35609 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ACTN2P35609 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ACTN2P35609 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ACTN2P35609 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN2P35609 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN2P35609 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.28■□□□□ 0.84
ACTN2P35609 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN2P35609 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
ACTN2P35609 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.28■□□□□ 0.84
ACTN2P35609 AC097658.1-201ENST00000475555 843 ntBASIC20.28■□□□□ 0.84
ACTN2P35609 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.28■□□□□ 0.84
ACTN2P35609 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.28■□□□□ 0.84
ACTN2P35609 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.28■□□□□ 0.84
ACTN2P35609 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.28■□□□□ 0.84
ACTN2P35609 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.28■□□□□ 0.84
ACTN2P35609 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.28■□□□□ 0.84
ACTN2P35609 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN2P35609 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.28■□□□□ 0.84
ACTN2P35609 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ACTN2P35609 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms