Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.69■□□□□ 0.58
LAMA1P25391 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMA1P25391 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LAMA1P25391 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMA1P25391 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
LAMA1P25391 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LAMA1P25391 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LAMA1P25391 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMA1P25391 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.68■□□□□ 0.58
LAMA1P25391 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LAMA1P25391 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LAMA1P25391 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
LAMA1P25391 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.68■□□□□ 0.58
LAMA1P25391 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMA1P25391 AP000593.1-201ENST00000393668 712 ntBASIC18.68■□□□□ 0.58
LAMA1P25391 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LAMA1P25391 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.68■□□□□ 0.58
LAMA1P25391 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LAMA1P25391 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.68■□□□□ 0.58
LAMA1P25391 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.68■□□□□ 0.58
LAMA1P25391 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LAMA1P25391 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.68■□□□□ 0.58
LAMA1P25391 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMA1P25391 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMA1P25391 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LAMA1P25391 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LAMA1P25391 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LAMA1P25391 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.67■□□□□ 0.58
LAMA1P25391 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LAMA1P25391 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LAMA1P25391 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LAMA1P25391 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.67■□□□□ 0.58
LAMA1P25391 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LAMA1P25391 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
LAMA1P25391 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LAMA1P25391 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LAMA1P25391 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
LAMA1P25391 AL662844.1-201ENST00000546340 181 ntBASIC18.67■□□□□ 0.58
LAMA1P25391 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.67■□□□□ 0.58
LAMA1P25391 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.67■□□□□ 0.58
LAMA1P25391 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LAMA1P25391 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LAMA1P25391 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 FAAHP1-202ENST00000446499 1238 ntBASIC18.66■□□□□ 0.58
LAMA1P25391 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.66■□□□□ 0.58
LAMA1P25391 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
LAMA1P25391 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.66■□□□□ 0.58
LAMA1P25391 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.66■□□□□ 0.58
LAMA1P25391 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LAMA1P25391 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LAMA1P25391 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.66■□□□□ 0.58
LAMA1P25391 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
LAMA1P25391 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LAMA1P25391 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LAMA1P25391 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.65■□□□□ 0.58
LAMA1P25391 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.65■□□□□ 0.58
LAMA1P25391 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LAMA1P25391 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.65■□□□□ 0.58
LAMA1P25391 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.65■□□□□ 0.58
LAMA1P25391 AC120114.3-201ENST00000611923 658 ntBASIC18.65■□□□□ 0.58
LAMA1P25391 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LAMA1P25391 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LAMA1P25391 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LAMA1P25391 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LAMA1P25391 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LAMA1P25391 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LAMA1P25391 KRT16P4-201ENST00000453883 522 ntBASIC18.65■□□□□ 0.58
LAMA1P25391 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.65■□□□□ 0.58
LAMA1P25391 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.65■□□□□ 0.58
LAMA1P25391 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.65■□□□□ 0.58
LAMA1P25391 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LAMA1P25391 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LAMA1P25391 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.65■□□□□ 0.58
LAMA1P25391 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.65■□□□□ 0.58
LAMA1P25391 AC106795.1-205ENST00000512851 1056 ntBASIC18.65■□□□□ 0.58
LAMA1P25391 AL160237.2-201ENST00000556165 472 ntBASIC18.65■□□□□ 0.58
LAMA1P25391 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LAMA1P25391 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LAMA1P25391 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LAMA1P25391 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.64■□□□□ 0.58
LAMA1P25391 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LAMA1P25391 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.64■□□□□ 0.57
LAMA1P25391 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms