Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP24386 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP24386 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP24386 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CHMP24386 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP24386 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP24386 AC018553.1-201ENST00000616682 1458 ntBASIC17.82■□□□□ 0.44
CHMP24386 AL135905.2-201ENST00000584934 1404 ntBASIC17.82■□□□□ 0.44
CHMP24386 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 AL049812.1-201ENST00000432563 2267 ntBASIC17.82■□□□□ 0.44
CHMP24386 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
CHMP24386 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.82■□□□□ 0.44
CHMP24386 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP24386 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP24386 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.82■□□□□ 0.44
CHMP24386 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CHMP24386 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CHMP24386 AC007613.1-201ENST00000572811 2597 ntBASIC17.82■□□□□ 0.44
CHMP24386 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP24386 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CHMP24386 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CHMP24386 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP24386 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CHMP24386 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP24386 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP24386 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CHMP24386 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CHMP24386 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP24386 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP24386 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP24386 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.81■□□□□ 0.44
CHMP24386 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.81■□□□□ 0.44
CHMP24386 RARRES2P10-201ENST00000564312 460 ntBASIC17.81■□□□□ 0.44
CHMP24386 AP001412.1-201ENST00000608405 714 ntBASIC17.81■□□□□ 0.44
CHMP24386 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP24386 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
CHMP24386 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP24386 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP24386 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP24386 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CHMP24386 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHMP24386 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.8■□□□□ 0.44
CHMP24386 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.8■□□□□ 0.44
CHMP24386 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CHMP24386 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHMP24386 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CHMP24386 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMP24386 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.8■□□□□ 0.44
CHMP24386 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMP24386 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.8■□□□□ 0.44
CHMP24386 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.8■□□□□ 0.44
CHMP24386 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.8■□□□□ 0.44
CHMP24386 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 AP006587.1-201ENST00000534129 1502 ntBASIC17.8■□□□□ 0.44
CHMP24386 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.8■□□□□ 0.44
CHMP24386 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.8■□□□□ 0.44
CHMP24386 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHMP24386 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CHMP24386 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 AC006333.2-201ENST00000607957 2099 ntBASIC17.79■□□□□ 0.44
CHMP24386 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHMP24386 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.79■□□□□ 0.44
CHMP24386 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms