Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA1P17096 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGA1P17096 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.82■□□□□ 0.76
HMGA1P17096 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA1P17096 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGA1P17096 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA1P17096 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGA1P17096 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA1P17096 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA1P17096 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGA1P17096 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGA1P17096 AL158211.5-201ENST00000623583 2518 ntBASIC19.81■□□□□ 0.76
HMGA1P17096 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
HMGA1P17096 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA1P17096 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGA1P17096 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
HMGA1P17096 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA1P17096 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGA1P17096 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA1P17096 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA1P17096 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA1P17096 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGA1P17096 FAM86EP-206ENST00000510506 987 ntBASIC19.81■□□□□ 0.76
HMGA1P17096 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.81■□□□□ 0.76
HMGA1P17096 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.81■□□□□ 0.76
HMGA1P17096 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
HMGA1P17096 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.81■□□□□ 0.76
HMGA1P17096 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGA1P17096 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA1P17096 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA1P17096 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA1P17096 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGA1P17096 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA1P17096 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA1P17096 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA1P17096 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGA1P17096 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HMGA1P17096 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA1P17096 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA1P17096 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGA1P17096 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGA1P17096 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.8■□□□□ 0.76
HMGA1P17096 AL671277.2-201ENST00000458060 996 ntBASIC19.8■□□□□ 0.76
HMGA1P17096 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.8■□□□□ 0.76
HMGA1P17096 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGA1P17096 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGA1P17096 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGA1P17096 AC091076.1-201ENST00000610741 619 ntBASIC19.8■□□□□ 0.76
HMGA1P17096 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.8■□□□□ 0.76
HMGA1P17096 AL121956.5-201ENST00000625261 221 ntBASIC19.8■□□□□ 0.76
HMGA1P17096 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA1P17096 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA1P17096 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA1P17096 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HMGA1P17096 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGA1P17096 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGA1P17096 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGA1P17096 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.8■□□□□ 0.76
HMGA1P17096 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HMGA1P17096 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA1P17096 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA1P17096 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
HMGA1P17096 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HMGA1P17096 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
HMGA1P17096 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA1P17096 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA1P17096 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA1P17096 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGA1P17096 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA1P17096 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGA1P17096 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGA1P17096 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.79■□□□□ 0.76
HMGA1P17096 HYMAI.1-201ENST00000620949 238 ntBASIC19.79■□□□□ 0.76
HMGA1P17096 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGA1P17096 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA1P17096 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HMGA1P17096 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA1P17096 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA1P17096 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGA1P17096 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGA1P17096 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGA1P17096 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA1P17096 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA1P17096 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA1P17096 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA1P17096 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGA1P17096 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA1P17096 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGA1P17096 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA1P17096 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA1P17096 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGA1P17096 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGA1P17096 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGA1P17096 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGA1P17096 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGA1P17096 STARP1-201ENST00000397973 869 ntBASIC19.78■□□□□ 0.76
HMGA1P17096 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGA1P17096 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMGA1P17096 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HMGA1P17096 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms