Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
MT-ND3P03897 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 AC009113.1-201ENST00000570267 2443 ntBASIC19.43■□□□□ 0.7
MT-ND3P03897 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 AC026471.1-201ENST00000564629 3026 ntBASIC19.43■□□□□ 0.7
MT-ND3P03897 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND3P03897 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.43■□□□□ 0.7
MT-ND3P03897 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.43■□□□□ 0.7
MT-ND3P03897 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
MT-ND3P03897 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND3P03897 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND3P03897 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND3P03897 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND3P03897 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.42■□□□□ 0.7
MT-ND3P03897 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.42■□□□□ 0.7
MT-ND3P03897 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.42■□□□□ 0.7
MT-ND3P03897 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MT-ND3P03897 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND3P03897 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND3P03897 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND3P03897 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.42■□□□□ 0.7
MT-ND3P03897 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.42■□□□□ 0.7
MT-ND3P03897 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.42■□□□□ 0.7
MT-ND3P03897 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.42■□□□□ 0.7
MT-ND3P03897 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.42■□□□□ 0.7
MT-ND3P03897 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.42■□□□□ 0.7
MT-ND3P03897 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.42■□□□□ 0.7
MT-ND3P03897 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.42■□□□□ 0.7
MT-ND3P03897 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.42■□□□□ 0.7
MT-ND3P03897 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND3P03897 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
MT-ND3P03897 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.42■□□□□ 0.7
MT-ND3P03897 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND3P03897 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MT-ND3P03897 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND3P03897 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.41■□□□□ 0.7
MT-ND3P03897 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
MT-ND3P03897 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
MT-ND3P03897 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
MT-ND3P03897 AC008403.3-201ENST00000598924 454 ntBASIC19.41■□□□□ 0.7
MT-ND3P03897 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
MT-ND3P03897 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.41■□□□□ 0.7
MT-ND3P03897 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MT-ND3P03897 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
MT-ND3P03897 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.41■□□□□ 0.7
MT-ND3P03897 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND3P03897 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MT-ND3P03897 TFP1-202ENST00000475455 1573 ntBASIC19.4■□□□□ 0.7
MT-ND3P03897 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MT-ND3P03897 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MT-ND3P03897 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MT-ND3P03897 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.4■□□□□ 0.7
MT-ND3P03897 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.4■□□□□ 0.7
MT-ND3P03897 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MT-ND3P03897 UBE2SP1-201ENST00000450587 669 ntBASIC19.4■□□□□ 0.7
MT-ND3P03897 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.4■□□□□ 0.7
MT-ND3P03897 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MT-ND3P03897 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
MT-ND3P03897 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MT-ND3P03897 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.4■□□□□ 0.7
MT-ND3P03897 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
MT-ND3P03897 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.4■□□□□ 0.7
MT-ND3P03897 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.4■□□□□ 0.7
MT-ND3P03897 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND3P03897 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.4■□□□□ 0.7
MT-ND3P03897 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MT-ND3P03897 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MT-ND3P03897 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.39■□□□□ 0.7
MT-ND3P03897 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.39■□□□□ 0.7
MT-ND3P03897 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND3P03897 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.39■□□□□ 0.69
MT-ND3P03897 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms