Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.18■□□□□ 0.66
PDGFBP01127 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PDGFBP01127 AL031284.1-201ENST00000419297 478 ntBASIC19.18■□□□□ 0.66
PDGFBP01127 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.18■□□□□ 0.66
PDGFBP01127 FAM197Y8-203ENST00000450145 560 ntBASIC19.18■□□□□ 0.66
PDGFBP01127 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.18■□□□□ 0.66
PDGFBP01127 AC073648.2-201ENST00000510116 352 ntBASIC19.18■□□□□ 0.66
PDGFBP01127 AC106730.1-201ENST00000566722 1090 ntBASIC19.18■□□□□ 0.66
PDGFBP01127 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.18■□□□□ 0.66
PDGFBP01127 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.18■□□□□ 0.66
PDGFBP01127 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.18■□□□□ 0.66
PDGFBP01127 AC005332.3-201ENST00000589904 676 ntBASIC19.18■□□□□ 0.66
PDGFBP01127 TERC-201ENST00000602385 541 ntBASIC19.18■□□□□ 0.66
PDGFBP01127 AC064862.7-201ENST00000604520 867 ntBASIC19.18■□□□□ 0.66
PDGFBP01127 AL139424.1-201ENST00000607572 797 ntBASIC19.18■□□□□ 0.66
PDGFBP01127 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.18■□□□□ 0.66
PDGFBP01127 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PDGFBP01127 AC243591.1-201ENST00000452967 1364 ntBASIC19.18■□□□□ 0.66
PDGFBP01127 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PDGFBP01127 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.17■□□□□ 0.66
PDGFBP01127 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PDGFBP01127 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PDGFBP01127 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.17■□□□□ 0.66
PDGFBP01127 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.17■□□□□ 0.66
PDGFBP01127 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 AC005104.2-201ENST00000427818 678 ntBASIC19.17■□□□□ 0.66
PDGFBP01127 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.17■□□□□ 0.66
PDGFBP01127 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.17■□□□□ 0.66
PDGFBP01127 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PDGFBP01127 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.17■□□□□ 0.66
PDGFBP01127 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.17■□□□□ 0.66
PDGFBP01127 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.17■□□□□ 0.66
PDGFBP01127 AC090616.6-201ENST00000582640 721 ntBASIC19.17■□□□□ 0.66
PDGFBP01127 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.17■□□□□ 0.66
PDGFBP01127 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.17■□□□□ 0.66
PDGFBP01127 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PDGFBP01127 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFBP01127 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFBP01127 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFBP01127 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFBP01127 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFBP01127 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFBP01127 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFBP01127 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.16■□□□□ 0.66
PDGFBP01127 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PDGFBP01127 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.16■□□□□ 0.66
PDGFBP01127 NUS1P2-201ENST00000417358 873 ntBASIC19.16■□□□□ 0.66
PDGFBP01127 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFBP01127 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.16■□□□□ 0.66
PDGFBP01127 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.16■□□□□ 0.66
PDGFBP01127 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.16■□□□□ 0.66
PDGFBP01127 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.16■□□□□ 0.66
PDGFBP01127 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.16■□□□□ 0.66
PDGFBP01127 Z69720.1-201ENST00000601483 472 ntBASIC19.16■□□□□ 0.66
PDGFBP01127 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.16■□□□□ 0.66
PDGFBP01127 AL691403.2-201ENST00000618460 490 ntBASIC19.16■□□□□ 0.66
PDGFBP01127 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PDGFBP01127 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFBP01127 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.16■□□□□ 0.66
PDGFBP01127 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PDGFBP01127 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.15■□□□□ 0.66
PDGFBP01127 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.15■□□□□ 0.66
PDGFBP01127 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PDGFBP01127 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PDGFBP01127 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDGFBP01127 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.15■□□□□ 0.66
PDGFBP01127 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms