Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SPCS2P1-201ENST00000561636 679 ntBASIC8.53□□□□□ -1.04
USH2AO75445 AC139887.3-201ENST00000568585 713 ntBASIC8.53□□□□□ -1.04
USH2AO75445 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC8.53□□□□□ -1.04
USH2AO75445 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC8.53□□□□□ -1.04
USH2AO75445 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
USH2AO75445 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC8.53□□□□□ -1.04
USH2AO75445 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC8.53□□□□□ -1.04
USH2AO75445 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC8.53□□□□□ -1.04
USH2AO75445 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC8.53□□□□□ -1.04
USH2AO75445 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 AC036111.1-201ENST00000533973 1582 ntBASIC8.53□□□□□ -1.04
USH2AO75445 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
USH2AO75445 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
USH2AO75445 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
USH2AO75445 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.04
USH2AO75445 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
USH2AO75445 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.04
USH2AO75445 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
USH2AO75445 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
USH2AO75445 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC8.52□□□□□ -1.04
USH2AO75445 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC8.52□□□□□ -1.04
USH2AO75445 GREM1-201ENST00000560677 623 ntTSL 4 BASIC8.52□□□□□ -1.04
USH2AO75445 AL592071.1-201ENST00000611956 408 ntBASIC8.52□□□□□ -1.04
USH2AO75445 AC116407.3-201ENST00000623905 1129 ntBASIC8.52□□□□□ -1.04
USH2AO75445 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
USH2AO75445 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 AC093909.1-201ENST00000504731 1122 ntBASIC8.52□□□□□ -1.05
USH2AO75445 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC8.52□□□□□ -1.05
USH2AO75445 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
USH2AO75445 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 POM121L3P-201ENST00000419331 1163 ntBASIC8.52□□□□□ -1.05
USH2AO75445 DNAJB3-201ENST00000446806 729 ntBASIC8.52□□□□□ -1.05
USH2AO75445 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC8.52□□□□□ -1.05
USH2AO75445 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC8.52□□□□□ -1.05
USH2AO75445 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC8.52□□□□□ -1.05
USH2AO75445 AC090616.6-201ENST00000582640 721 ntBASIC8.52□□□□□ -1.05
USH2AO75445 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC8.52□□□□□ -1.05
USH2AO75445 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC8.52□□□□□ -1.05
USH2AO75445 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
USH2AO75445 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC8.52□□□□□ -1.05
USH2AO75445 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC8.52□□□□□ -1.05
USH2AO75445 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
USH2AO75445 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 UBC-206ENST00000538617 1303 ntTSL 5 BASIC8.51□□□□□ -1.05
USH2AO75445 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
USH2AO75445 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC8.51□□□□□ -1.05
USH2AO75445 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC8.51□□□□□ -1.05
USH2AO75445 MIR4469-201ENST00000583919 79 ntBASIC8.51□□□□□ -1.05
USH2AO75445 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC8.51□□□□□ -1.05
USH2AO75445 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC8.51□□□□□ -1.05
USH2AO75445 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 FAM197Y3-203ENST00000618346 717 ntBASIC8.51□□□□□ -1.05
USH2AO75445 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
USH2AO75445 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
USH2AO75445 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
USH2AO75445 AC099343.3-201ENST00000605834 2503 ntBASIC8.51□□□□□ -1.05
USH2AO75445 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC8.51□□□□□ -1.05
USH2AO75445 FGFR3P6-201ENST00000457012 610 ntBASIC8.51□□□□□ -1.05
USH2AO75445 AL136038.4-201ENST00000603606 1261 ntBASIC8.51□□□□□ -1.05
USH2AO75445 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC8.51□□□□□ -1.05
USH2AO75445 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC8.51□□□□□ -1.05
USH2AO75445 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 KLK8-202ENST00000320838 456 ntTSL 5 BASIC8.51□□□□□ -1.05
USH2AO75445 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC8.51□□□□□ -1.05
USH2AO75445 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC8.51□□□□□ -1.05
USH2AO75445 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
USH2AO75445 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC8.51□□□□□ -1.05
USH2AO75445 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC8.51□□□□□ -1.05
USH2AO75445 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
USH2AO75445 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC8.51□□□□□ -1.05
USH2AO75445 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms