Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CUBNO60494 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CUBNO60494 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.27■□□□□ 0.04
CUBNO60494 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.27■□□□□ 0.04
CUBNO60494 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.27■□□□□ 0.04
CUBNO60494 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.27■□□□□ 0.04
CUBNO60494 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CUBNO60494 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CUBNO60494 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.27■□□□□ 0.03
CUBNO60494 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CUBNO60494 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CUBNO60494 SAPCD2P3-201ENST00000455031 850 ntBASIC15.27■□□□□ 0.03
CUBNO60494 AC117500.6-201ENST00000624871 588 ntBASIC15.27■□□□□ 0.03
CUBNO60494 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CUBNO60494 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CUBNO60494 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CUBNO60494 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CUBNO60494 AKR1C7P-201ENST00000305623 895 ntBASIC15.26■□□□□ 0.03
CUBNO60494 TSPY22P-201ENST00000427496 604 ntBASIC15.26■□□□□ 0.03
CUBNO60494 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
CUBNO60494 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.26■□□□□ 0.03
CUBNO60494 AL121672.3-201ENST00000608644 468 ntBASIC15.26■□□□□ 0.03
CUBNO60494 REXO1L6P-202ENST00000619970 1078 ntBASIC15.26■□□□□ 0.03
CUBNO60494 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.26■□□□□ 0.03
CUBNO60494 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CUBNO60494 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CUBNO60494 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CUBNO60494 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CUBNO60494 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CUBNO60494 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CUBNO60494 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CUBNO60494 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.26■□□□□ 0.03
CUBNO60494 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.26■□□□□ 0.03
CUBNO60494 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.26■□□□□ 0.03
CUBNO60494 GPAT2P1-201ENST00000444924 1672 ntBASIC15.26■□□□□ 0.03
CUBNO60494 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.26■□□□□ 0.03
CUBNO60494 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CUBNO60494 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CUBNO60494 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CUBNO60494 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.26■□□□□ 0.03
CUBNO60494 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CUBNO60494 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CUBNO60494 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CUBNO60494 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
CUBNO60494 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CUBNO60494 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CUBNO60494 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.25■□□□□ 0.03
CUBNO60494 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CUBNO60494 AC055717.3-201ENST00000622967 595 ntBASIC15.25■□□□□ 0.03
CUBNO60494 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
CUBNO60494 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CUBNO60494 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.25■□□□□ 0.03
CUBNO60494 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.25■□□□□ 0.03
CUBNO60494 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.25■□□□□ 0.03
CUBNO60494 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.25■□□□□ 0.03
CUBNO60494 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.25■□□□□ 0.03
CUBNO60494 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.25■□□□□ 0.03
CUBNO60494 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 AL353801.3-201ENST00000609898 542 ntBASIC15.25■□□□□ 0.03
CUBNO60494 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CUBNO60494 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.24■□□□□ 0.03
CUBNO60494 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 Z83836.1-201ENST00000624605 1642 ntBASIC15.24■□□□□ 0.03
CUBNO60494 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.24■□□□□ 0.03
CUBNO60494 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 SEC1P-202ENST00000473944 940 ntBASIC15.24■□□□□ 0.03
CUBNO60494 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.24■□□□□ 0.03
CUBNO60494 AL157384.1-201ENST00000445995 2473 ntBASIC15.24■□□□□ 0.03
CUBNO60494 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 AP001271.2-201ENST00000624018 1556 ntBASIC15.24■□□□□ 0.03
CUBNO60494 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.24■□□□□ 0.03
CUBNO60494 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.24■□□□□ 0.03
CUBNO60494 AL590627.1-203ENST00000421194 1026 ntBASIC15.24■□□□□ 0.03
CUBNO60494 AC034232.1-201ENST00000506026 1064 ntBASIC15.24■□□□□ 0.03
CUBNO60494 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CUBNO60494 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.24■□□□□ 0.03
CUBNO60494 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.24■□□□□ 0.03
CUBNO60494 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CUBNO60494 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.24■□□□□ 0.03
CUBNO60494 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CUBNO60494 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms