Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 SMG8-203ENST00000578922 2178 ntBASIC18■□□□□ 0.47
URB1O60287 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 LINC01465-201ENST00000408887 1940 ntBASIC18■□□□□ 0.47
URB1O60287 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
URB1O60287 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
URB1O60287 BMF-207ENST00000559701 630 ntTSL 3 BASIC18■□□□□ 0.47
URB1O60287 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18■□□□□ 0.47
URB1O60287 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18■□□□□ 0.47
URB1O60287 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
URB1O60287 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.99■□□□□ 0.47
URB1O60287 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
URB1O60287 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.99■□□□□ 0.47
URB1O60287 PMS2P1-201ENST00000431037 1228 ntBASIC17.99■□□□□ 0.47
URB1O60287 HMGN1P19-201ENST00000436976 333 ntBASIC17.99■□□□□ 0.47
URB1O60287 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.99■□□□□ 0.47
URB1O60287 AL160286.2-201ENST00000567150 934 ntBASIC17.99■□□□□ 0.47
URB1O60287 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.99■□□□□ 0.47
URB1O60287 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.99■□□□□ 0.47
URB1O60287 AC121338.2-201ENST00000622535 1744 ntBASIC17.99■□□□□ 0.47
URB1O60287 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
URB1O60287 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
URB1O60287 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
URB1O60287 PHGDH-210ENST00000641115 1638 ntBASIC17.98■□□□□ 0.47
URB1O60287 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
URB1O60287 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 MIR574-201ENST00000385209 96 ntBASIC17.98■□□□□ 0.47
URB1O60287 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
URB1O60287 HLA-F-220ENST00000434407 884 ntBASIC17.98■□□□□ 0.47
URB1O60287 AC091304.2-201ENST00000564639 760 ntBASIC17.98■□□□□ 0.47
URB1O60287 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.98■□□□□ 0.47
URB1O60287 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 KRT18P1-202ENST00000452408 1331 ntBASIC17.98■□□□□ 0.47
URB1O60287 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
URB1O60287 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
URB1O60287 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.98■□□□□ 0.47
URB1O60287 DRAXINP1-201ENST00000437611 948 ntBASIC17.98■□□□□ 0.47
URB1O60287 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 AC034232.1-201ENST00000506026 1064 ntBASIC17.98■□□□□ 0.47
URB1O60287 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
URB1O60287 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
URB1O60287 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.98■□□□□ 0.47
URB1O60287 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
URB1O60287 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.98■□□□□ 0.47
URB1O60287 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.98■□□□□ 0.47
URB1O60287 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.98■□□□□ 0.47
URB1O60287 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.98■□□□□ 0.47
URB1O60287 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
URB1O60287 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
URB1O60287 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
URB1O60287 TSPY12P-201ENST00000421279 868 ntBASIC17.97■□□□□ 0.47
URB1O60287 AC079776.4-201ENST00000511039 504 ntBASIC17.97■□□□□ 0.47
URB1O60287 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.97■□□□□ 0.47
URB1O60287 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
URB1O60287 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
URB1O60287 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 TMEM179-206ENST00000616017 1645 ntBASIC17.97■□□□□ 0.47
URB1O60287 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
URB1O60287 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.97■□□□□ 0.47
URB1O60287 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
URB1O60287 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
URB1O60287 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
URB1O60287 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms