Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.86■□□□□ 0.29
SGCEO43556 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SGCEO43556 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SGCEO43556 AC141586.3-201ENST00000562166 1838 ntBASIC16.86■□□□□ 0.29
SGCEO43556 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.86■□□□□ 0.29
SGCEO43556 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SGCEO43556 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.86■□□□□ 0.29
SGCEO43556 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SGCEO43556 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.86■□□□□ 0.29
SGCEO43556 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SGCEO43556 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
SGCEO43556 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.85■□□□□ 0.29
SGCEO43556 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 TEX21P-204ENST00000641479 1693 ntBASIC16.85■□□□□ 0.29
SGCEO43556 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.85■□□□□ 0.29
SGCEO43556 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SGCEO43556 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.85■□□□□ 0.29
SGCEO43556 KRT18P29-201ENST00000397031 1267 ntBASIC16.85■□□□□ 0.29
SGCEO43556 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.85■□□□□ 0.29
SGCEO43556 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SGCEO43556 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.85■□□□□ 0.29
SGCEO43556 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.85■□□□□ 0.29
SGCEO43556 HLA-A-209ENST00000638375 975 ntBASIC16.85■□□□□ 0.29
SGCEO43556 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.85■□□□□ 0.29
SGCEO43556 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SGCEO43556 AC018445.3-201ENST00000624177 1945 ntBASIC16.85■□□□□ 0.29
SGCEO43556 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.85■□□□□ 0.29
SGCEO43556 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.85■□□□□ 0.29
SGCEO43556 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SGCEO43556 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.85■□□□□ 0.29
SGCEO43556 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.85■□□□□ 0.29
SGCEO43556 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SGCEO43556 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.85■□□□□ 0.29
SGCEO43556 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.85■□□□□ 0.29
SGCEO43556 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.85■□□□□ 0.29
SGCEO43556 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SGCEO43556 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.84■□□□□ 0.29
SGCEO43556 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SGCEO43556 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.84■□□□□ 0.29
SGCEO43556 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.84■□□□□ 0.29
SGCEO43556 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SGCEO43556 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.84■□□□□ 0.29
SGCEO43556 ITM2C-210ENST00000620962 501 ntBASIC16.84■□□□□ 0.29
SGCEO43556 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.84■□□□□ 0.29
SGCEO43556 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.84■□□□□ 0.29
SGCEO43556 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SGCEO43556 LINC01465-201ENST00000408887 1940 ntBASIC16.84■□□□□ 0.29
SGCEO43556 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.84■□□□□ 0.29
SGCEO43556 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SGCEO43556 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.83■□□□□ 0.29
SGCEO43556 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SGCEO43556 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SGCEO43556 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SGCEO43556 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.83■□□□□ 0.28
SGCEO43556 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGCEO43556 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGCEO43556 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SGCEO43556 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.83■□□□□ 0.28
SGCEO43556 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SGCEO43556 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.83■□□□□ 0.28
SGCEO43556 RPPH1-201ENST00000516869 333 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms