Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.32■□□□□ 0.36
SMAD9O15198 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.32■□□□□ 0.36
SMAD9O15198 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.32■□□□□ 0.36
SMAD9O15198 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 FAM197Y1-201ENST00000421178 764 ntBASIC17.32■□□□□ 0.36
SMAD9O15198 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.32■□□□□ 0.36
SMAD9O15198 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.32■□□□□ 0.36
SMAD9O15198 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.32■□□□□ 0.36
SMAD9O15198 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.32■□□□□ 0.36
SMAD9O15198 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SMAD9O15198 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD9O15198 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.31■□□□□ 0.36
SMAD9O15198 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SMAD9O15198 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 LINC01465-201ENST00000408887 1940 ntBASIC17.31■□□□□ 0.36
SMAD9O15198 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 KRT16P1-201ENST00000399124 1418 ntBASIC17.31■□□□□ 0.36
SMAD9O15198 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SMAD9O15198 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.31■□□□□ 0.36
SMAD9O15198 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.31■□□□□ 0.36
SMAD9O15198 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SMAD9O15198 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SMAD9O15198 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.31■□□□□ 0.36
SMAD9O15198 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.31■□□□□ 0.36
SMAD9O15198 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.31■□□□□ 0.36
SMAD9O15198 CD177P1-201ENST00000606252 935 ntBASIC17.31■□□□□ 0.36
SMAD9O15198 CR392000.1-201ENST00000624770 1228 ntBASIC17.31■□□□□ 0.36
SMAD9O15198 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SMAD9O15198 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.31■□□□□ 0.36
SMAD9O15198 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.31■□□□□ 0.36
SMAD9O15198 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SMAD9O15198 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SMAD9O15198 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD9O15198 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.31■□□□□ 0.36
SMAD9O15198 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SMAD9O15198 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 ZNF815P-204ENST00000434898 1737 ntBASIC17.3■□□□□ 0.36
SMAD9O15198 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SMAD9O15198 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.3■□□□□ 0.36
SMAD9O15198 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SMAD9O15198 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SMAD9O15198 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.3■□□□□ 0.36
SMAD9O15198 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.3■□□□□ 0.36
SMAD9O15198 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.3■□□□□ 0.36
SMAD9O15198 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SMAD9O15198 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.3■□□□□ 0.36
SMAD9O15198 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.3■□□□□ 0.36
SMAD9O15198 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.3■□□□□ 0.36
SMAD9O15198 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMAD9O15198 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SMAD9O15198 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.3■□□□□ 0.36
SMAD9O15198 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.3■□□□□ 0.36
SMAD9O15198 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMAD9O15198 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
SMAD9O15198 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMAD9O15198 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMAD9O15198 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.29■□□□□ 0.36
SMAD9O15198 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.29■□□□□ 0.36
SMAD9O15198 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SMAD9O15198 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMAD9O15198 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SMAD9O15198 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMAD9O15198 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.29■□□□□ 0.36
SMAD9O15198 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.29■□□□□ 0.36
SMAD9O15198 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.29■□□□□ 0.36
SMAD9O15198 AC004980.1-204ENST00000429707 299 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms