Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMX2-CTNND1H3BSU7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 SLC25A1P2-201ENST00000430693 912 ntBASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC007225.1-201ENST00000566331 1836 ntBASIC18.72■□□□□ 0.59
TMX2-CTNND1H3BSU7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 FAM207BP-201ENST00000447172 505 ntBASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 RCC2P6-201ENST00000526625 1557 ntBASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMX2-CTNND1H3BSU7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
TMX2-CTNND1H3BSU7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
TMX2-CTNND1H3BSU7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 AK4P3-201ENST00000418260 669 ntBASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 AL512604.3-201ENST00000569583 964 ntBASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMX2-CTNND1H3BSU7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 AC010653.2-201ENST00000623505 997 ntBASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMX2-CTNND1H3BSU7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms