Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 AC104581.1-202ENST00000635932 2618 ntBASIC20.62■□□□□ 0.89
CCDC66A2RUB6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 AC009113.1-201ENST00000570267 2443 ntBASIC20.62■□□□□ 0.89
CCDC66A2RUB6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.62■□□□□ 0.89
CCDC66A2RUB6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 AC005181.1-201ENST00000604782 1256 ntBASIC20.61■□□□□ 0.89
CCDC66A2RUB6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 OR6D1P-202ENST00000641007 5290 ntBASIC20.61■□□□□ 0.89
CCDC66A2RUB6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC66A2RUB6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC66A2RUB6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 AC133552.2-202ENST00000575694 574 ntBASIC20.59■□□□□ 0.89
CCDC66A2RUB6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC66A2RUB6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC66A2RUB6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
CCDC66A2RUB6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC66A2RUB6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC66A2RUB6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC66A2RUB6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC66A2RUB6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CCDC66A2RUB6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC66A2RUB6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms