Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AC073587.1-201ENST00000447093 876 ntBASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 PRSS3P4-201ENST00000453323 162 ntBASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 AC007016.1-201ENST00000512110 244 ntBASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 SNORA31.6-201ENST00000516241 130 ntBASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 RN7SKP276-201ENST00000516242 268 ntBASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 TRAV37-201ENST00000553906 342 ntBASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 AC123912.5-201ENST00000605470 343 ntBASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 AC112200.1-201ENST00000625015 234 ntBASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 Z99571.1-201ENST00000636677 394 ntBASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 AC092376.2-201ENST00000622621 4116 ntBASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 AC006206.1-201ENST00000544842 3387 ntBASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HCN4Q9Y3Q4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.57
HCN4Q9Y3Q4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.21□□□□□ -1.57
HCN4Q9Y3Q4 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
HCN4Q9Y3Q4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
HCN4Q9Y3Q4 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HCN4Q9Y3Q4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
HCN4Q9Y3Q4 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.21□□□□□ -1.57
HCN4Q9Y3Q4 AP000560.1-201ENST00000624150 1937 ntBASIC5.21□□□□□ -1.57
HCN4Q9Y3Q4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.57
HCN4Q9Y3Q4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 UBE2L2-201ENST00000254302 429 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 Y_RNA.29-201ENST00000362570 113 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 RNU6-1317P-201ENST00000364582 104 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 Y_RNA.462-201ENST00000384268 102 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 MIR301A-201ENST00000385261 86 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 PPIAP9-201ENST00000403866 498 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 RPL21P38-201ENST00000418090 167 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AC096920.1-201ENST00000423991 241 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 MTATP6P4-201ENST00000427725 675 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AC092573.2-201ENST00000434546 243 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AC093414.1-201ENST00000434712 514 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 RPL26P6-201ENST00000440913 438 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 MED28P2-201ENST00000475771 317 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 RNU6-143P-201ENST00000516942 93 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 RNU6-1315P-201ENST00000517187 99 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 AC100778.3-201ENST00000580060 1750 ntBASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
HCN4Q9Y3Q4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 SNORD27-201ENST00000363981 72 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 RNA5SP509-201ENST00000364577 119 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 RPS26P8-201ENST00000393490 348 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 RN7SKP177-201ENST00000410567 355 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AL513331.1-201ENST00000411908 397 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AL592045.1-201ENST00000429867 352 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 HSPD1P21-201ENST00000436541 245 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AC011276.1-201ENST00000469688 323 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AC098869.1-201ENST00000481627 292 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 RPL30P10-201ENST00000488148 337 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AC026784.1-201ENST00000507986 352 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 FKBP1BP1-201ENST00000553366 325 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AMZ2P1-203ENST00000565833 850 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AC130289.1-201ENST00000577321 73 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AL353748.2-201ENST00000622148 471 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AC243829.7-201ENST00000633081 225 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 AL049555.1-201ENST00000562834 1933 ntBASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms