Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 RNA5SP27-201ENST00000363839 119 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 RNU6-217P-201ENST00000384164 104 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 RNU6-19P-201ENST00000384718 107 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 MIR135A2-201ENST00000384854 100 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 MIR218-1-201ENST00000384999 110 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AL033519.2-201ENST00000403958 392 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AC096649.2-201ENST00000416186 393 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AL158823.1-201ENST00000418441 478 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AC092047.1-201ENST00000424997 240 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 DNAJC19P4-201ENST00000440115 345 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 PIGFP3-201ENST00000441918 722 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 RPL23AP6-201ENST00000446637 472 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 HSPE1P24-201ENST00000450782 238 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 SSXP1-201ENST00000453640 473 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 RNU6-250P-201ENST00000516958 103 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AC069294.1-201ENST00000608397 350 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AC103710.2-201ENST00000609912 942 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AC091304.6-201ENST00000619761 202 ntBASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.28□□□□□ -2.2
COMMD3Q9UBI1 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 MIR583-201ENST00000384846 75 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 RSL24D1P4-201ENST00000400938 484 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 RNU2-49P-201ENST00000410666 184 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 EDDM3CP-201ENST00000415977 425 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 MTCO3P46-201ENST00000425787 232 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AL512637.2-201ENST00000431287 1256 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 GTF2IP7-202ENST00000436677 309 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 BNIP3P2-201ENST00000441221 577 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 RFC5P1-201ENST00000454419 874 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AC092757.1-201ENST00000467293 467 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 MTCYBP35-201ENST00000503630 1137 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AC011352.3-201ENST00000505162 593 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AC008526.1-201ENST00000509149 338 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AP005597.4-201ENST00000526762 229 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 VN1R88P-201ENST00000596787 292 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AC104763.3-201ENST00000613765 618 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AL773524.1-201ENST00000614065 229 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AP002791.1-201ENST00000623291 381 ntBASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
COMMD3Q9UBI1 AL356473.1-201ENST00000406203 1408 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 HMGB1P17-201ENST00000403495 628 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 USP9YP6-201ENST00000413550 854 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AMD1P1-201ENST00000457220 922 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AP1S2P1-201ENST00000457344 379 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AC005410.1-202ENST00000460347 485 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 SNORA31.6-201ENST00000516241 130 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 SCARNA15.2-201ENST00000516409 127 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AK6P1-201ENST00000540219 478 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AC124947.2-202ENST00000552735 133 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 ATP5F1P7-201ENST00000567330 760 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 SNORD39.3-201ENST00000584451 71 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AL078605.1-201ENST00000603529 500 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 AC107905.1-201ENST00000616204 426 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 FRG1HP-204ENST00000617940 757 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 MIR6852-201ENST00000621699 66 ntBASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.26□□□□□ -2.21
COMMD3Q9UBI1 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 OR4G11P-202ENST00000642116 1414 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 RNU5A-1-201ENST00000362698 116 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 HMGN2P39-201ENST00000398005 273 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 MIR1323-201ENST00000408090 73 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 AC244636.1-201ENST00000421152 228 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 BEND7P1-201ENST00000422058 457 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 AL035407.1-201ENST00000429211 571 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 HMGB1P18-201ENST00000438801 619 ntBASIC1.25□□□□□ -2.21
COMMD3Q9UBI1 MTCO3P2-201ENST00000457365 171 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms