Protein–RNA interactions for Protein: Q9NZN3

EHD3, EH domain-containing protein 3, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EHD3Q9NZN3 AC117522.3-201ENST00000507974 584 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 RBBP4P6-201ENST00000508098 202 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 AC005921.1-201ENST00000510589 286 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 SCARNA15.1-201ENST00000516384 125 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 MTND4P7-201ENST00000523876 130 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 AC010928.3-201ENST00000587712 541 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 XIAPP1-201ENST00000603162 600 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 AL592436.1-201ENST00000605135 558 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 HMGN2P28-201ENST00000606102 262 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 AC092807.2-201ENST00000609367 243 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 AC068831.8-201ENST00000620171 435 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 AC110801.1-201ENST00000623590 212 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 FAM91A3P-201ENST00000456826 2544 ntBASIC3.79□□□□□ -1.8
EHD3Q9NZN3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.79□□□□□ -1.8
EHD3Q9NZN3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 RNA5SP189-201ENST00000364920 115 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 SNORA23-201ENST00000365128 182 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AL022722.2-201ENST00000402519 180 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 RNA5SP317-201ENST00000410176 116 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 RNA5SP311-201ENST00000411290 116 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 RPL7AP73-201ENST00000413490 353 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 RPL30P2-201ENST00000414021 291 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AL354751.2-201ENST00000415471 210 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AC090774.1-201ENST00000435925 246 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AC083863.1-201ENST00000438811 231 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AC020550.1-201ENST00000447385 163 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AC002456.2-201ENST00000509356 380 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 SNORA19.2-201ENST00000516013 114 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 RNU6-390P-201ENST00000516259 103 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 RNA5SP315-201ENST00000516340 116 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 Y_RNA.691-201ENST00000516611 103 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 RNA5SP312-201ENST00000517068 116 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AC008489.1-201ENST00000524271 483 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 IGHV3-29-201ENST00000604817 344 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 MIR8058-201ENST00000615737 89 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 uc_338.11-201ENST00000619132 160 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 MIR492-201ENST00000638676 116 ntBASIC3.78□□□□□ -1.8
EHD3Q9NZN3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
EHD3Q9NZN3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 AC091152.2-201ENST00000591628 2569 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 SNORA31-201ENST00000362607 130 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 RNU6-837P-201ENST00000391056 108 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 RNU6-550P-201ENST00000391057 101 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 RNU2-43P-201ENST00000410306 190 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 HMGB1P37-201ENST00000439613 609 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.77□□□□□ -1.81
EHD3Q9NZN3 Y_RNA.632-201ENST00000459189 102 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 RNU7-66P-201ENST00000459469 62 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 AL132838.2-201ENST00000492041 314 ntBASIC3.77□□□□□ -1.81
EHD3Q9NZN3 RPL23AP55-201ENST00000498163 452 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms