Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 RNA5SP122-201ENST00000384457 108 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 RNU6-146P-201ENST00000384602 108 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 RNU6-159P-201ENST00000391080 106 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 RN7SKP286-201ENST00000410894 299 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AL354868.1-201ENST00000417077 482 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AC113412.1-201ENST00000425840 504 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AL512844.2-201ENST00000433990 593 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 RN7SL273P-201ENST00000481561 299 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AC139453.3-201ENST00000493276 369 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 DUTP1-201ENST00000493631 470 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 RNU6-941P-201ENST00000516346 108 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 IGKV3D-34-201ENST00000522638 302 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AC090616.3-201ENST00000582184 217 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 SNORD84-203ENST00000584275 78 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AC069307.1-201ENST00000602820 447 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 ADAM24P-201ENST00000398655 2101 ntBASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRDM9Q9NQV7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 SNORA63.4-201ENST00000362763 126 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 Y_RNA.245-201ENST00000364493 95 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 U8.10-201ENST00000384260 133 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 SNORA70E-201ENST00000384492 135 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 RNY4P18-201ENST00000391107 89 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 BMS1P17-202ENST00000416720 316 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 RPL7AP61-201ENST00000443410 636 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 LINC02210-201ENST00000444561 288 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 AC092798.1-201ENST00000458542 409 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 RN7SL188P-201ENST00000469842 285 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 Y_RNA.797-201ENST00000515977 94 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 RNU6-1198P-201ENST00000516904 67 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 AC100767.1-201ENST00000528178 123 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 RN7SL787P-201ENST00000613000 284 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 AC005332.5-201ENST00000591222 2919 ntBASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRDM9Q9NQV7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.34□□□□□ -1.56
PRDM9Q9NQV7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PRDM9Q9NQV7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PRDM9Q9NQV7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PRDM9Q9NQV7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PRDM9Q9NQV7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 AC026523.2-201ENST00000625039 7739 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 AL359693.1-201ENST00000614959 2407 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 SNORD115-8-201ENST00000363856 82 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 SNORD115-38-201ENST00000365037 82 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 RNU6-72P-201ENST00000384285 79 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 AC091390.3-201ENST00000426478 338 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 AC007560.1-201ENST00000426912 237 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 GSTM5P1-201ENST00000434751 660 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 AL359073.1-201ENST00000448036 403 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 RPL31P13-201ENST00000484151 370 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 AL049874.1-201ENST00000489560 388 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 RNU6-659P-201ENST00000516454 104 ntBASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.33□□□□□ -1.56
PRDM9Q9NQV7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms