Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 MIR4319-201ENST00000577285 85 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AC022662.1-201ENST00000580252 331 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AC005498.1-201ENST00000592125 465 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 RPP40P2-201ENST00000603596 712 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AL355877.2-201ENST00000603670 358 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AC090186.1-201ENST00000605991 572 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AL133445.2-201ENST00000611191 527 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AL136981.2-201ENST00000617319 734 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AP000484.1-201ENST00000620067 1252 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 AL160394.1-201ENST00000624765 724 ntBASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
EXOSC4Q9NPD3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
EXOSC4Q9NPD3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 RNU6-853P-201ENST00000364306 107 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 RN7SKP226-201ENST00000364912 300 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 OR5H15-201ENST00000383696 930 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 MIR320C1-201ENST00000408566 88 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 RNU6-757P-201ENST00000410334 100 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 RNU6-516P-201ENST00000411381 104 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 Z92545.1-201ENST00000411782 234 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 MTCO3P30-201ENST00000426425 670 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AL590383.1-201ENST00000428602 75 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 SNRPEP7-201ENST00000438350 220 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AL049734.2-201ENST00000441066 616 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 DUXAP8-207ENST00000456786 622 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AC104435.1-201ENST00000483483 166 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AC138853.1-201ENST00000503549 823 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 RNU6-840P-201ENST00000517275 65 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AC087465.1-201ENST00000560574 245 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AL049838.1-201ENST00000563647 981 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AC105137.2-201ENST00000569073 466 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 MIR5694-201ENST00000581190 76 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 VN1R92P-201ENST00000598511 928 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AL356280.1-201ENST00000603614 379 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AL357094.1-201ENST00000603845 844 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AL139344.1-201ENST00000605228 195 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AL078595.3-201ENST00000623815 1166 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AC019226.1-201ENST00000625666 515 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 AC007336.1-201ENST00000576365 3828 ntBASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
EXOSC4Q9NPD3 CCT4P2-201ENST00000233836 1548 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 RNU6-217P-201ENST00000384164 104 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 RNA5SP184-201ENST00000411071 108 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 PIGPP2-201ENST00000411569 458 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 SSR1P2-201ENST00000415208 787 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 ELOCP9-201ENST00000418624 239 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AC106883.1-201ENST00000418805 562 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AC007919.1-201ENST00000429380 217 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 IFNA11P-201ENST00000446352 526 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 ATG12P2-201ENST00000456830 416 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 RBM43P1-201ENST00000476891 1081 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 GZMAP1-201ENST00000503054 631 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 RNA5SP356-201ENST00000515972 94 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 EIF4BP1-201ENST00000554881 351 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 UBE2L4-201ENST00000587688 464 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AL596327.1-201ENST00000603629 213 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 AL158801.5-201ENST00000623123 465 ntBASIC2.07□□□□□ -2.08
EXOSC4Q9NPD3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms