Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 RNU6-703P-201ENST00000516946 107 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AC109479.2-201ENST00000517842 174 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 TRMT10BP1-201ENST00000519377 943 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AP005597.4-201ENST00000526762 229 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 MIR4715-201ENST00000584117 79 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AL356055.1-201ENST00000602528 446 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AL670379.10-201ENST00000604330 253 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AL670379.9-201ENST00000605428 253 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AC135507.2-201ENST00000612443 309 ntBASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRAIPQ9BWF2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AC018529.3-201ENST00000624212 2254 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AC126755.2-208ENST00000327792 462 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AC138969.1-213ENST00000331436 462 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 SNORD62.1-201ENST00000362541 86 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AC140479.3-201ENST00000418944 1126 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AC099548.1-201ENST00000421443 426 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AC093151.1-201ENST00000427711 313 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 RPS15AP10-201ENST00000432472 382 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AL162591.2-201ENST00000449634 317 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 CYCSP34-201ENST00000458172 304 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AC116337.1-201ENST00000509680 687 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AC113155.1-201ENST00000511141 769 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 RNU6-1183P-201ENST00000517054 60 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AL121821.2-201ENST00000556081 394 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 H3F3AP1-201ENST00000559984 334 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 CYCSP40-201ENST00000575927 294 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 ELOCP5-201ENST00000604924 333 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 RNU4-89P-201ENST00000607443 133 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 AC084781.2-201ENST00000615568 161 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 SCARNA4-202ENST00000625402 129 ntBASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC5.17□□□□□ -1.58
TRAIPQ9BWF2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 RNA5SP502-201ENST00000362694 119 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 SNORA62-201ENST00000365493 153 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 RNU6-95P-201ENST00000384697 107 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 SNORD73A-201ENST00000386062 65 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 MTCYBP4-201ENST00000401524 249 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 AL590632.1-201ENST00000424289 371 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 RPL7P37-201ENST00000425095 738 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 AL162151.2-201ENST00000448875 158 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 UBE2CP3-201ENST00000502715 450 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 NDUFB4P9-201ENST00000511646 388 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 RNU6-1016P-201ENST00000516689 94 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 AL133255.1-201ENST00000606374 441 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 AL359757.2-201ENST00000624309 274 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 Z69720.2-201ENST00000624755 279 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 AC087190.4-201ENST00000574616 8334 ntBASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRAIPQ9BWF2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
TRAIPQ9BWF2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.15□□□□□ -1.58
TRAIPQ9BWF2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRAIPQ9BWF2 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRAIPQ9BWF2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRAIPQ9BWF2 AL590762.2-201ENST00000395798 571 ntBASIC5.15□□□□□ -1.59
TRAIPQ9BWF2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAIPQ9BWF2 AC245054.2-201ENST00000415639 319 ntBASIC5.15□□□□□ -1.59
TRAIPQ9BWF2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.15□□□□□ -1.59
TRAIPQ9BWF2 CKS1BP6-201ENST00000424932 240 ntBASIC5.15□□□□□ -1.59
TRAIPQ9BWF2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.15□□□□□ -1.59
TRAIPQ9BWF2 SSXP4-201ENST00000451349 245 ntBASIC5.15□□□□□ -1.59
TRAIPQ9BWF2 snoU13.28-201ENST00000459235 104 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms