Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC016256.1-201ENST00000547971 354 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 AC112693.2-201ENST00000556538 232 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 MIR3921-201ENST00000577308 85 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 AC004825.2-201ENST00000616634 455 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 AC092628.2-201ENST00000622492 339 ntBASIC5.28□□□□□ -1.56
USB1Q9BQ65 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USB1Q9BQ65 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USB1Q9BQ65 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
USB1Q9BQ65 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
USB1Q9BQ65 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
USB1Q9BQ65 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
USB1Q9BQ65 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.27□□□□□ -1.57
USB1Q9BQ65 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USB1Q9BQ65 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.27□□□□□ -1.57
USB1Q9BQ65 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
USB1Q9BQ65 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USB1Q9BQ65 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USB1Q9BQ65 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
USB1Q9BQ65 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.27□□□□□ -1.57
USB1Q9BQ65 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USB1Q9BQ65 RNA5SP477-201ENST00000362639 119 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 MIR539-201ENST00000365690 78 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
USB1Q9BQ65 RNU6-80P-201ENST00000384195 107 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
USB1Q9BQ65 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
USB1Q9BQ65 MIR513C-201ENST00000401352 84 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 SDHDP6-201ENST00000414693 480 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 AL355433.1-201ENST00000422804 300 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 BX276092.6-201ENST00000430476 250 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 AC010095.1-201ENST00000443543 144 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 BX276092.8-201ENST00000455722 250 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 NXT1P1-201ENST00000458481 316 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 Y_RNA.797-201ENST00000515977 94 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 RNA5SP340-201ENST00000517132 107 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 RNA5SP291-201ENST00000517222 105 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 AC020916.2-201ENST00000591242 360 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 AC105254.2-201ENST00000603636 436 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 AL136228.1-201ENST00000622221 319 ntBASIC5.27□□□□□ -1.57
USB1Q9BQ65 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC5.27□□□□□ -1.57
USB1Q9BQ65 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
USB1Q9BQ65 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
USB1Q9BQ65 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
USB1Q9BQ65 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USB1Q9BQ65 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USB1Q9BQ65 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USB1Q9BQ65 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USB1Q9BQ65 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
USB1Q9BQ65 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USB1Q9BQ65 RNU4-11P-201ENST00000365287 132 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 RPS20P10-201ENST00000451209 253 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 AL445665.1-202ENST00000452436 324 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 RPS27AP3-201ENST00000453803 454 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 RN7SL193P-201ENST00000491708 276 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 AL132838.2-201ENST00000492041 314 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 AP004607.1-201ENST00000524456 203 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 MIR4776-2-201ENST00000580204 80 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 MIR6809-201ENST00000612189 116 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 AL139099.4-201ENST00000614802 114 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 AC008873.1-201ENST00000625051 138 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 SNORA43.4-201ENST00000629559 138 ntBASIC5.26□□□□□ -1.57
USB1Q9BQ65 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
USB1Q9BQ65 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USB1Q9BQ65 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
USB1Q9BQ65 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
USB1Q9BQ65 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.25□□□□□ -1.57
USB1Q9BQ65 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
USB1Q9BQ65 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
USB1Q9BQ65 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.25□□□□□ -1.57
USB1Q9BQ65 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
USB1Q9BQ65 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 AC110774.1-201ENST00000623567 2018 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
USB1Q9BQ65 SNORD115-8-201ENST00000363856 82 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 SNORD32A-201ENST00000364805 84 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 SNORD115-38-201ENST00000365037 82 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 SNORA20-201ENST00000384662 132 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
USB1Q9BQ65 MIR1203-201ENST00000408812 85 ntBASIC5.25□□□□□ -1.57
USB1Q9BQ65 RPL35AP3-201ENST00000414680 288 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms