Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 RNU6-639P-201ENST00000384074 107 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 MIR554-201ENST00000384874 96 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 HSPE1P12-201ENST00000412576 301 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 AC017083.1-201ENST00000428093 483 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 CALM2P2-201ENST00000428512 440 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 RPL23AP69-201ENST00000431134 458 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 AF228730.2-201ENST00000438784 848 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC6.11□□□□□ -1.43
ARXQ96QS3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.11□□□□□ -1.43
ARXQ96QS3 AC004801.2-202ENST00000463559 283 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 Y_RNA.711-201ENST00000516993 102 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ARXQ96QS3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
ARXQ96QS3 AC016925.2-201ENST00000605108 242 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.11□□□□□ -1.43
ARXQ96QS3 MIR8058-201ENST00000615737 89 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 AC011155.2-201ENST00000623202 216 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 AL078596.1-201ENST00000624856 447 ntBASIC6.11□□□□□ -1.43
ARXQ96QS3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.11□□□□□ -1.43
ARXQ96QS3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.11□□□□□ -1.43
ARXQ96QS3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC6.11□□□□□ -1.43
ARXQ96QS3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
ARXQ96QS3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
ARXQ96QS3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC6.11□□□□□ -1.43
ARXQ96QS3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ARXQ96QS3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ARXQ96QS3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ARXQ96QS3 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ARXQ96QS3 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ARXQ96QS3 RNU6-254P-201ENST00000363377 107 ntBASIC6.1□□□□□ -1.43
ARXQ96QS3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.1□□□□□ -1.43
ARXQ96QS3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ARXQ96QS3 RNU6-946P-201ENST00000383878 107 ntBASIC6.1□□□□□ -1.43
ARXQ96QS3 RNU6-1077P-201ENST00000410506 102 ntBASIC6.1□□□□□ -1.43
ARXQ96QS3 RPS20P14-201ENST00000412545 360 ntBASIC6.1□□□□□ -1.43
ARXQ96QS3 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.1□□□□□ -1.43
ARXQ96QS3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.1□□□□□ -1.43
ARXQ96QS3 RPS17P8-201ENST00000434525 335 ntBASIC6.1□□□□□ -1.43
ARXQ96QS3 MTND3P2-201ENST00000438452 342 ntBASIC6.1□□□□□ -1.43
ARXQ96QS3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.1□□□□□ -1.43
ARXQ96QS3 AL162395.1-201ENST00000457882 422 ntBASIC6.1□□□□□ -1.43
ARXQ96QS3 AC005741.1-201ENST00000511094 432 ntBASIC6.1□□□□□ -1.43
ARXQ96QS3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.1□□□□□ -1.43
ARXQ96QS3 RNU6-711P-201ENST00000517255 106 ntBASIC6.1□□□□□ -1.43
ARXQ96QS3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC6.1□□□□□ -1.43
ARXQ96QS3 RN7SL652P-201ENST00000577769 300 ntBASIC6.1□□□□□ -1.43
ARXQ96QS3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC6.1□□□□□ -1.43
ARXQ96QS3 AC067852.3-201ENST00000589177 561 ntBASIC6.1□□□□□ -1.43
ARXQ96QS3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ARXQ96QS3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC6.1□□□□□ -1.43
ARXQ96QS3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
ARXQ96QS3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.1□□□□□ -1.43
ARXQ96QS3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
ARXQ96QS3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
ARXQ96QS3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC6.1□□□□□ -1.43
ARXQ96QS3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC6.09□□□□□ -1.43
ARXQ96QS3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
ARXQ96QS3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
ARXQ96QS3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC6.09□□□□□ -1.43
ARXQ96QS3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ARXQ96QS3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC6.09□□□□□ -1.43
ARXQ96QS3 UBE2L2-201ENST00000254302 429 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ARXQ96QS3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ARXQ96QS3 Y_RNA.144-201ENST00000363521 113 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 SNORD46.1-201ENST00000364139 104 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 SMIM11P1-201ENST00000369586 178 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 RNU6-190P-201ENST00000384154 102 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 RNU1-13P-201ENST00000384499 162 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 MIR548K-201ENST00000408406 116 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.09□□□□□ -1.43
ARXQ96QS3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.09□□□□□ -1.43
ARXQ96QS3 AC093106.2-201ENST00000428212 385 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 Z82205.1-201ENST00000428456 297 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 GPM6BP2-201ENST00000432046 144 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 GPM6BP1-201ENST00000446387 144 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.09□□□□□ -1.43
ARXQ96QS3 AC092798.1-201ENST00000458542 409 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC6.09□□□□□ -1.43
ARXQ96QS3 HMGN2P13-201ENST00000476476 274 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 RN7SL132P-201ENST00000478131 296 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ARXQ96QS3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC6.09□□□□□ -1.43
ARXQ96QS3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.09□□□□□ -1.43
ARXQ96QS3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.09□□□□□ -1.43
ARXQ96QS3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ARXQ96QS3 AC008737.2-201ENST00000599446 118 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 AC007619.2-201ENST00000605743 379 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 AL121655.1-201ENST00000605811 308 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 UBE2Q2P6-201ENST00000612666 153 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 AC133104.2-201ENST00000615272 193 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 AL391261.4-201ENST00000616012 481 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 AC073308.1-201ENST00000623696 305 ntBASIC6.09□□□□□ -1.43
ARXQ96QS3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ARXQ96QS3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ARXQ96QS3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ARXQ96QS3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC6.08□□□□□ -1.44
ARXQ96QS3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ARXQ96QS3 MTND5P16-201ENST00000460269 1703 ntBASIC6.08□□□□□ -1.44
ARXQ96QS3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms