Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RNU6-1078P-201ENST00000364522 103 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 MIR888-201ENST00000401186 77 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 SNORA11.4-201ENST00000408823 129 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 RNU2-72P-201ENST00000411175 163 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 HMGB1P11-201ENST00000413899 637 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 AL161449.1-201ENST00000414531 1199 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 Z98742.3-201ENST00000418637 326 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 AC005005.2-201ENST00000420779 380 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 MRPS36P1-201ENST00000421291 307 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 ATG12P2-201ENST00000456830 416 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 AC006499.2-201ENST00000513470 337 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 NRON-201ENST00000517270 370 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 SNORD14A-201ENST00000606526 91 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 FTX_3.1-201ENST00000610451 147 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 AC012640.5-201ENST00000623897 319 ntBASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CCDC148Q8NFR7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 SNORA63.3-201ENST00000362682 132 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 Y_RNA.548-201ENST00000384656 105 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 RNU6-220P-201ENST00000390919 107 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 RN7SKP223-201ENST00000410582 62 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 RN7SKP192-201ENST00000411291 327 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 AC023141.4-201ENST00000412031 328 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 PTP4A1P7-201ENST00000423476 514 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 RPS15AP5-201ENST00000436276 388 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 PGBD4P3-201ENST00000440731 581 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 OSTCP8-201ENST00000445117 448 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 AL353705.4-201ENST00000449661 238 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 RPL18AP17-201ENST00000455326 198 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 AC022447.3-201ENST00000506865 495 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 RNU6-840P-201ENST00000517275 65 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 AL353997.4-201ENST00000586196 166 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 AC008507.2-201ENST00000588402 1176 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 AC025588.2-201ENST00000604851 466 ntBASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC148Q8NFR7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
CCDC148Q8NFR7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 RNA5SP37-201ENST00000365420 130 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 RNU6-140P-201ENST00000384566 108 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 MORF4L1P6-201ENST00000418771 268 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 HMGB1P9-201ENST00000429856 646 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 IPO7P1-201ENST00000442031 636 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 MTATP6P7-201ENST00000453315 681 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 AC108734.3-201ENST00000481241 1165 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 AP005902.1-201ENST00000521358 186 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 AC091544.4-201ENST00000555268 342 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 ISCA1P3-201ENST00000577104 373 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 MIR6840-201ENST00000611937 71 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 AC024257.5-201ENST00000612739 531 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 AC009268.2-201ENST00000621925 457 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 AC068057.2-201ENST00000624047 895 ntBASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC148Q8NFR7 AC004944.1-201ENST00000517807 3059 ntBASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 AL138713.1-201ENST00000624026 2130 ntBASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 SNORA23-201ENST00000365128 182 ntBASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 AC068533.2-201ENST00000411872 306 ntBASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 USP9YP19-201ENST00000412165 485 ntBASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 AL139415.2-201ENST00000431968 163 ntBASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 AC096638.1-201ENST00000444678 216 ntBASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 RPL26P9-201ENST00000457466 433 ntBASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 RNU7-136P-201ENST00000458819 69 ntBASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 AC069528.1-202ENST00000482888 637 ntBASIC2.45□□□□□ -2.02
CCDC148Q8NFR7 AC109486.1-201ENST00000486833 374 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms