Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MIR8057-201ENST00000620957 69 ntBASIC0.87□□□□□ -2.27
SPTSSBQ8NFR3 MTCO1P23-201ENST00000415223 1526 ntBASIC0.87□□□□□ -2.27
SPTSSBQ8NFR3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
SPTSSBQ8NFR3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 MIR26B-201ENST00000362251 77 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 RNA5SP240-201ENST00000365355 128 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 SNORA25B-201ENST00000365507 128 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AL139098.1-201ENST00000407291 389 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AL356320.1-201ENST00000429616 163 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 ZYG11AP1-201ENST00000430329 837 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 MTCO3P11-201ENST00000455103 774 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 RPL31P58-201ENST00000469001 379 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 SLC25A15P5-201ENST00000508033 253 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 GTF3AP2-201ENST00000557014 266 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AC023825.1-201ENST00000566704 1030 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AC104581.2-201ENST00000572227 430 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AC245100.7-201ENST00000609678 442 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AC091953.2-201ENST00000623979 160 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AC007490.1-201ENST00000624321 703 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AL355596.1-201ENST00000565399 3996 ntBASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
SPTSSBQ8NFR3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 MIR141-201ENST00000384975 95 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 MCTS2P-201ENST00000394552 546 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 RPL23AP29-201ENST00000397284 453 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 RPL36AP36-201ENST00000418616 301 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 SFR1P2-201ENST00000421841 730 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 VN1R108P-201ENST00000431580 830 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC108938.1-201ENST00000451204 136 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 CAB39P1-201ENST00000502277 460 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 ANXA2P1-201ENST00000505539 926 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC026801.2-201ENST00000515352 425 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AP003497.1-201ENST00000528472 562 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC084851.1-201ENST00000529105 249 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 NDUFA5P6-201ENST00000542110 379 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AP002770.2-201ENST00000543613 532 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AL356432.3-201ENST00000568952 465 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC024619.4-201ENST00000580924 316 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AP001485.1-201ENST00000604799 199 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC026790.2-201ENST00000606282 430 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 CR589904.2-201ENST00000612533 440 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 MIR5739-201ENST00000619803 80 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AL356266.1-201ENST00000623311 483 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AL355480.1-201ENST00000629041 99 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 MTND1P37-201ENST00000636562 264 ntBASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.85□□□□□ -2.27
SPTSSBQ8NFR3 AC092881.1-201ENST00000638218 2733 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 AL449283.1-202ENST00000418249 604 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 ZDHHC20P2-201ENST00000424108 429 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 UBE2V1P4-201ENST00000425374 344 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 TOMM22P2-201ENST00000430735 237 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 Z98742.2-201ENST00000431564 187 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 AL121601.2-201ENST00000438019 707 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 S100A11P2-201ENST00000467589 312 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 MTAPP1-201ENST00000489154 819 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 RPS29P11-201ENST00000496507 171 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 RN7SKP179-201ENST00000516126 217 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 SNORA48.11-201ENST00000517015 89 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 RNU6-889P-201ENST00000517189 103 ntBASIC0.84□□□□□ -2.27
SPTSSBQ8NFR3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms