Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 ZNF72P-201ENST00000425869 1908 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 Y_RNA.461-201ENST00000384263 103 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 RNU6-713P-201ENST00000384761 107 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 SNORA11-201ENST00000408789 128 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AL030996.1-201ENST00000411430 235 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 UBE2D3P2-201ENST00000424409 445 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 RPL21P91-201ENST00000429231 479 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AL353997.1-201ENST00000432936 108 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 RPL29P29-201ENST00000448725 423 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 IFNWP4-201ENST00000453148 294 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 SCARNA10-201ENST00000459255 330 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 RPL23AP2-201ENST00000471227 466 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 NIP7P2-201ENST00000485801 544 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AC040926.1-201ENST00000530195 238 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 CBX3P8-201ENST00000532412 525 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AC074050.1-201ENST00000563247 211 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 ATP5J2P6-201ENST00000565203 266 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 MIR548AC-201ENST00000585049 88 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AL138825.1-201ENST00000618587 192 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AC140113.4-201ENST00000622087 222 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 LINC01355-201ENST00000566551 5444 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 AC005183.1-201ENST00000603687 1979 ntBASIC4.29□□□□□ -1.72
NUP43Q8NFH3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP43Q8NFH3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 Y_RNA.222-201ENST00000364264 102 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 Y_RNA.276-201ENST00000364732 109 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 Y_RNA.552-201ENST00000384665 112 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 MIR195-201ENST00000385194 87 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 MT-TW-201ENST00000387382 68 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 AL445529.1-201ENST00000398713 389 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 MIR298-201ENST00000401212 88 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 RNU6-1156P-201ENST00000410365 100 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 PGBD4P6-201ENST00000421501 610 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 DAP3P1-201ENST00000441522 278 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 CEACAMP6-201ENST00000452007 574 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 SUMO1P2-201ENST00000452524 304 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 RPL23AP65-201ENST00000475608 468 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 RN7SL481P-201ENST00000477764 299 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 AC108860.1-201ENST00000484521 383 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 RN7SL346P-201ENST00000491561 294 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 AC007016.1-201ENST00000512110 244 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 RNA5SP446-201ENST00000515955 82 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 AC078899.3-201ENST00000599065 212 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 AL591516.1-201ENST00000611326 274 ntBASIC4.28□□□□□ -1.72
NUP43Q8NFH3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP43Q8NFH3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.28□□□□□ -1.73
NUP43Q8NFH3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
NUP43Q8NFH3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.27□□□□□ -1.73
NUP43Q8NFH3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP43Q8NFH3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUP43Q8NFH3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP43Q8NFH3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUP43Q8NFH3 PCAT14-202ENST00000627127 3935 ntBASIC4.27□□□□□ -1.73
NUP43Q8NFH3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP43Q8NFH3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP43Q8NFH3 Y_RNA.48-201ENST00000362710 103 ntBASIC4.27□□□□□ -1.73
NUP43Q8NFH3 RNY3P11-201ENST00000364153 102 ntBASIC4.27□□□□□ -1.73
NUP43Q8NFH3 Y_RNA.214-201ENST00000364201 112 ntBASIC4.27□□□□□ -1.73
NUP43Q8NFH3 Y_RNA.350-201ENST00000365409 98 ntBASIC4.27□□□□□ -1.73
NUP43Q8NFH3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NUP43Q8NFH3 SNORA36C-201ENST00000384289 132 ntBASIC4.27□□□□□ -1.73
NUP43Q8NFH3 RNU2-64P-201ENST00000411315 191 ntBASIC4.27□□□□□ -1.73
NUP43Q8NFH3 AC063979.1-201ENST00000415539 377 ntBASIC4.27□□□□□ -1.73
NUP43Q8NFH3 AL353621.1-201ENST00000418219 243 ntBASIC4.27□□□□□ -1.73
NUP43Q8NFH3 HMGB1P27-201ENST00000431429 603 ntBASIC4.27□□□□□ -1.73
NUP43Q8NFH3 AL121871.1-201ENST00000443413 436 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms