Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AC105224.1-201ENST00000587055 421 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AF250324.2-201ENST00000608299 610 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AL359880.1-201ENST00000621879 266 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC093908.1-201ENST00000623125 8092 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AL136313.1-201ENST00000624804 202 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 SNORA50A-202ENST00000629536 136 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC103988.1-201ENST00000566382 2177 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 RNU6-1284P-201ENST00000363701 100 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 RNU6-76P-201ENST00000384060 104 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 SNORA48.5-201ENST00000391143 135 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 U3.39-201ENST00000408569 239 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 RNU4-55P-201ENST00000410731 137 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 RNA5SP107-201ENST00000411358 122 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AC017079.2-201ENST00000416102 485 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 RPS15AP6-201ENST00000420703 385 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 EIF1P1-201ENST00000421436 341 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 MTCO2P19-201ENST00000427513 598 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AC073464.1-201ENST00000429823 534 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AL158071.1-201ENST00000430315 461 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 MTCO3P45-201ENST00000443036 613 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AL049714.1-201ENST00000466686 347 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 RPS4XP22-201ENST00000480755 780 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 RN7SL504P-201ENST00000494496 287 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 KLHL2P1-201ENST00000508691 521 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AC011352.1-201ENST00000512300 793 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 PHBP14-201ENST00000512887 367 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AC027807.1-201ENST00000559921 996 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 MIR5680-201ENST00000577577 84 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 FAM60BP-201ENST00000578364 658 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AL391646.1-201ENST00000603860 190 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AL136363.1-201ENST00000605349 337 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AC012443.1-201ENST00000605605 231 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AC017083.3-201ENST00000609955 700 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 CR381653.2-201ENST00000624041 768 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 MIR6863-201ENST00000636112 90 ntBASIC3.68□□□□□ -1.82
VPS52Q8N1B4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS52Q8N1B4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 HSPE1P11-201ENST00000339579 310 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 RNY1P12-201ENST00000364251 105 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 MTCO3P40-201ENST00000392516 676 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 RN7SKP111-201ENST00000410349 271 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 UBE2FP1-201ENST00000416536 447 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 RPL21P66-201ENST00000426566 466 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 RPL26P6-201ENST00000440913 438 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC003071.1-201ENST00000451219 789 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 RN7SL594P-201ENST00000470590 287 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC012181.1-201ENST00000479895 423 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 RPS3AP14-201ENST00000483907 780 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC007182.2-201ENST00000489251 402 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC019235.1-201ENST00000503847 207 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AL117351.2-201ENST00000513571 157 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 MTND4LP26-201ENST00000518144 282 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AP001893.2-201ENST00000526949 202 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC123904.3-201ENST00000547218 814 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS52Q8N1B4 MTATP6P3-201ENST00000581686 676 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 MIR4276-201ENST00000584832 70 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC004067.1-201ENST00000608733 700 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC092954.2-201ENST00000609103 430 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AC004696.1-201ENST00000614345 607 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 AL157786.1-207ENST00000627771 695 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 SEPT14P19-203ENST00000633205 211 ntBASIC3.67□□□□□ -1.82
VPS52Q8N1B4 LRRC77P-213ENST00000637727 880 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms