Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RPS23P3-201ENST00000470993 430 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 RN7SL499P-201ENST00000481141 276 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC71Q8IV32 RPS15AP36-201ENST00000492022 382 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC71Q8IV32 RN7SKP272-201ENST00000516988 232 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC71Q8IV32 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AC027807.1-201ENST00000559921 996 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AL627309.6-201ENST00000606857 840 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AC097065.2-201ENST00000608159 533 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AC004908.3-201ENST00000610248 625 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AC073114.1-201ENST00000612027 490 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AC107871.2-201ENST00000612894 502 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CCDC71Q8IV32 AC000403.1-201ENST00000613696 3585 ntBASIC2.77□□□□□ -1.97
CCDC71Q8IV32 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC008568.2-201ENST00000623862 2313 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC108206.1-201ENST00000570186 4159 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC092447.7-201ENST00000422212 1621 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 SNORA54-201ENST00000384281 123 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 Y_RNA.598-201ENST00000410480 95 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 RNA5SP274-201ENST00000410484 108 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 UBE2FP1-201ENST00000416536 447 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 USP9YP13-201ENST00000417797 480 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 NDUFB4P7-201ENST00000423198 363 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AL356583.2-201ENST00000426536 280 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC016696.1-201ENST00000446949 318 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC108059.3-201ENST00000456388 214 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC093534.1-201ENST00000504977 132 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 CDC42P4-201ENST00000510507 563 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC022616.6-201ENST00000520479 119 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AP001804.3-201ENST00000525146 880 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC123904.2-201ENST00000548059 300 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC012414.6-201ENST00000568241 401 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 PIGPP4-201ENST00000584447 307 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 KC877982.1-201ENST00000602313 470 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC112191.3-201ENST00000604371 277 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC068276.1-201ENST00000605793 379 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC245517.5-201ENST00000611529 162 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC013476.2-201ENST00000614456 459 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 Z69908.1-201ENST00000622603 247 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 AC010149.2-201ENST00000637608 315 ntBASIC2.76□□□□□ -1.97
CCDC71Q8IV32 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC71Q8IV32 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 U3.4-201ENST00000363352 213 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 SNORD116-9-201ENST00000384000 95 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 SNORD116-3-201ENST00000384287 95 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 SNORD116-7-201ENST00000384404 95 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 SNORD116-5-201ENST00000384462 95 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 SNORD67-201ENST00000390833 111 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 RNU6-278P-201ENST00000390945 109 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 TXNP7-201ENST00000406296 293 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 RPL19P1-201ENST00000411635 428 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 AC008850.1-201ENST00000427546 362 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 TIMM9P1-201ENST00000436122 256 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 MTCO3P45-201ENST00000443036 613 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 MTND2P22-201ENST00000444325 1033 ntBASIC2.75□□□□□ -1.97
CCDC71Q8IV32 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC71Q8IV32 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms