Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF135Q8IUD6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RNF135Q8IUD6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF135Q8IUD6 AL450345.1-202ENST00000605741 3881 ntBASIC5.44□□□□□ -1.54
RNF135Q8IUD6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF135Q8IUD6 AP000560.1-201ENST00000624150 1937 ntBASIC5.44□□□□□ -1.54
RNF135Q8IUD6 OR4G2P-202ENST00000641004 1759 ntBASIC5.44□□□□□ -1.54
RNF135Q8IUD6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF135Q8IUD6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF135Q8IUD6 AL034549.2-201ENST00000618285 3373 ntBASIC5.44□□□□□ -1.54
RNF135Q8IUD6 NCAPGP1-201ENST00000505112 1814 ntBASIC5.44□□□□□ -1.54
RNF135Q8IUD6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 Z75746.1-201ENST00000440243 2080 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 AL592437.2-201ENST00000421655 2434 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 AL139811.1-201ENST00000424779 2299 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 AL391987.6-201ENST00000305671 199 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 Y_RNA.269-201ENST00000364685 89 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 MIR514A1-201ENST00000385133 98 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 MIR1298-201ENST00000408783 112 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 AL592148.1-201ENST00000413568 445 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 RPS12P23-201ENST00000419579 400 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 AC098869.1-201ENST00000481627 292 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 SNORA25.14-201ENST00000516481 132 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 Y_RNA.683-201ENST00000516508 93 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 MIR3667-201ENST00000581025 74 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 AC244107.2-201ENST00000611773 76 ntBASIC5.43□□□□□ -1.54
RNF135Q8IUD6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.43□□□□□ -1.54
RNF135Q8IUD6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 RNA5SP428-201ENST00000365129 132 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 RNA5SP235-201ENST00000365411 114 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 SNORA5.1-201ENST00000384275 131 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 AL080315.1-201ENST00000406055 466 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 RNA5SP494-201ENST00000410653 129 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 AC096920.1-201ENST00000423991 241 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 RNU7-120P-201ENST00000459334 63 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 RN7SL244P-201ENST00000493405 297 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 AC074250.1-201ENST00000511117 192 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 SNORA31.6-201ENST00000516241 130 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 RN7SKP21-201ENST00000516503 220 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 IGKV1-32-201ENST00000519290 311 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 AC243829.7-201ENST00000633081 225 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 AL450472.1-202ENST00000637286 180 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 MUC2-202ENST00000613187 4845 ntBASIC5.42□□□□□ -1.54
RNF135Q8IUD6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.42□□□□□ -1.54
RNF135Q8IUD6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RNF135Q8IUD6 AL365440.1-201ENST00000436135 2167 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 Y_RNA.27-201ENST00000362540 103 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 U3.3-201ENST00000362986 216 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 Y_RNA.83-201ENST00000363005 113 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 Y_RNA.277-201ENST00000364754 102 ntBASIC5.41□□□□□ -1.54
RNF135Q8IUD6 MIR124-3-201ENST00000384866 87 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms