Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 RNU6-223P-201ENST00000362830 107 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 Y_RNA.255-201ENST00000364581 97 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 Y_RNA.813-201ENST00000364639 102 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 RNU6-278P-201ENST00000390945 109 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 RNU6-754P-201ENST00000391166 107 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AL136116.1-201ENST00000403591 381 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 RNU2-47P-201ENST00000410649 186 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 Z99755.1-201ENST00000414048 380 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AL590399.6-201ENST00000446396 307 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 RPL29P29-201ENST00000448725 423 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AC068305.1-201ENST00000497406 726 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AC010486.1-201ENST00000511793 424 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 RNU2-10P-201ENST00000516375 211 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 RNU6-798P-201ENST00000516912 103 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 RN7SKP57-201ENST00000517248 293 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 CBX3P7-201ENST00000532876 502 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AL133271.1-201ENST00000538229 291 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 CR383656.7-201ENST00000548164 174 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AC018638.8-201ENST00000588755 281 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AC110741.2-201ENST00000605278 268 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AL158211.4-201ENST00000606988 584 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AC006065.5-201ENST00000623427 349 ntBASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.24□□□□□ -1.73
UBE3BQ7Z3V4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 RNU6-356P-201ENST00000384140 107 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 MIR454-201ENST00000390180 115 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 RPL30P2-201ENST00000414021 291 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 USP9YP7-201ENST00000436723 430 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 RPL35AP22-201ENST00000436855 335 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AL357552.1-201ENST00000445254 415 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 Z75741.1-201ENST00000446793 314 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AC115115.1-201ENST00000449927 248 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 USP9YP32-201ENST00000452432 430 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 snoU13.3-201ENST00000459441 104 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 GMFBP1-201ENST00000467831 427 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AL163973.1-201ENST00000484753 577 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 RPL38P4-201ENST00000502376 214 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AC105417.1-201ENST00000514691 285 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 Vault.1-201ENST00000516474 102 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AL162713.1-201ENST00000604480 262 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AC093838.1-201ENST00000613014 469 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AL354950.2-201ENST00000617939 290 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 AC092326.2-201ENST00000624772 1561 ntBASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
UBE3BQ7Z3V4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 RIOK3P1-201ENST00000418778 1528 ntBASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 RNU4-76P-201ENST00000364509 141 ntBASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 RNU6-996P-201ENST00000365438 107 ntBASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 MIR483-201ENST00000385070 76 ntBASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 MIR23A-201ENST00000385245 73 ntBASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 AL591416.1-201ENST00000404015 867 ntBASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 OR2AS1P-201ENST00000427827 319 ntBASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 OR4K11P-201ENST00000431829 904 ntBASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 RN7SL807P-201ENST00000470923 297 ntBASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 AC126389.1-201ENST00000477436 290 ntBASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.22□□□□□ -1.73
UBE3BQ7Z3V4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms