Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CDCA8Q53HL2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
CDCA8Q53HL2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDCA8Q53HL2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDCA8Q53HL2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDCA8Q53HL2 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDCA8Q53HL2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 PRO1804-201ENST00000623780 2050 ntBASIC5.78□□□□□ -1.48
CDCA8Q53HL2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 CISD1P1-201ENST00000393907 327 ntBASIC5.78□□□□□ -1.48
CDCA8Q53HL2 AL121834.1-202ENST00000404494 277 ntBASIC5.78□□□□□ -1.48
CDCA8Q53HL2 AL356095.1-201ENST00000417217 199 ntBASIC5.78□□□□□ -1.48
CDCA8Q53HL2 SSXP9-201ENST00000417503 292 ntBASIC5.78□□□□□ -1.48
CDCA8Q53HL2 AL160275.3-201ENST00000423876 471 ntBASIC5.78□□□□□ -1.48
CDCA8Q53HL2 HSFY6P-201ENST00000445573 403 ntBASIC5.78□□□□□ -1.48
CDCA8Q53HL2 RPS11P1-201ENST00000451072 473 ntBASIC5.78□□□□□ -1.48
CDCA8Q53HL2 KPNA2P1-201ENST00000458289 1591 ntBASIC5.78□□□□□ -1.48
CDCA8Q53HL2 AF213884.1-201ENST00000488102 463 ntBASIC5.78□□□□□ -1.48
CDCA8Q53HL2 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 AC112484.5-201ENST00000624189 228 ntBASIC5.78□□□□□ -1.48
CDCA8Q53HL2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.78□□□□□ -1.48
CDCA8Q53HL2 SNORD3H-201ENST00000384486 214 ntBASIC5.77□□□□□ -1.49
CDCA8Q53HL2 RNU1-13P-201ENST00000384499 162 ntBASIC5.77□□□□□ -1.49
CDCA8Q53HL2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 RNU6-1304P-201ENST00000411374 106 ntBASIC5.77□□□□□ -1.49
CDCA8Q53HL2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 MIR3160-1-201ENST00000577972 85 ntBASIC5.77□□□□□ -1.49
CDCA8Q53HL2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 ZYXP1-201ENST00000617638 118 ntBASIC5.77□□□□□ -1.49
CDCA8Q53HL2 PLCE1P1-201ENST00000622094 305 ntBASIC5.77□□□□□ -1.49
CDCA8Q53HL2 AL353748.2-201ENST00000622148 471 ntBASIC5.77□□□□□ -1.49
CDCA8Q53HL2 AC068724.3-201ENST00000625906 87 ntBASIC5.77□□□□□ -1.49
CDCA8Q53HL2 AL669831.3-213ENST00000636676 183 ntBASIC5.77□□□□□ -1.49
CDCA8Q53HL2 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.77□□□□□ -1.49
CDCA8Q53HL2 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 Z73965.1-201ENST00000623412 2297 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 Y_RNA.5-201ENST00000362334 102 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 SNORA60-201ENST00000362396 134 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 RNA5SP52-201ENST00000362448 134 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 RNU6-1115P-201ENST00000362490 106 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 RNU6-371P-201ENST00000364283 108 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 Y_RNA.252-201ENST00000364556 101 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 SNORA75B-201ENST00000384053 137 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 RNU6-1105P-201ENST00000384774 107 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 Y_RNA.646-201ENST00000410980 101 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 AL645568.3-201ENST00000433683 316 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 AL359672.1-201ENST00000442302 409 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 AL135752.1-201ENST00000479477 471 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 AC021146.2-201ENST00000504736 556 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 AC108043.1-201ENST00000512696 574 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 Y_RNA.708-201ENST00000516950 96 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 AC007938.3-201ENST00000604965 623 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 7SK.10-201ENST00000621414 298 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 AC091925.1-201ENST00000623204 462 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDCA8Q53HL2 AL365440.1-201ENST00000436135 2167 ntBASIC5.76□□□□□ -1.49
CDCA8Q53HL2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CDCA8Q53HL2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CDCA8Q53HL2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDCA8Q53HL2 Y_RNA.158-201ENST00000363651 101 ntBASIC5.75□□□□□ -1.49
CDCA8Q53HL2 RNU6-1032P-201ENST00000384100 107 ntBASIC5.75□□□□□ -1.49
CDCA8Q53HL2 RNU6-45P-201ENST00000384471 107 ntBASIC5.75□□□□□ -1.49
CDCA8Q53HL2 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.75□□□□□ -1.49
CDCA8Q53HL2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.75□□□□□ -1.49
CDCA8Q53HL2 SNRPEP4-201ENST00000435815 279 ntBASIC5.75□□□□□ -1.49
CDCA8Q53HL2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.75□□□□□ -1.49
CDCA8Q53HL2 RPS26P28-201ENST00000470806 348 ntBASIC5.75□□□□□ -1.49
CDCA8Q53HL2 AC117503.1-201ENST00000472241 394 ntBASIC5.75□□□□□ -1.49
CDCA8Q53HL2 AC106872.2-201ENST00000494303 480 ntBASIC5.75□□□□□ -1.49
CDCA8Q53HL2 RN7SKP295-201ENST00000517264 153 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms