Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC087894.1-201ENST00000538359 518 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.59□□□□□ -1.99
CCNA1P78396 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.59□□□□□ -1.99
CCNA1P78396 AC069304.2-201ENST00000605154 435 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 FTX_3.1-201ENST00000610451 147 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 AL603758.1-201ENST00000618654 241 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 MIR6132-201ENST00000622083 109 ntBASIC2.59□□□□□ -1.99
CCNA1P78396 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCNA1P78396 MTND4P27-201ENST00000450813 1354 ntBASIC2.59□□□□□ -2
CCNA1P78396 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
CCNA1P78396 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCNA1P78396 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CCNA1P78396 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
CCNA1P78396 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCNA1P78396 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
CCNA1P78396 Y_RNA.234-201ENST00000364409 97 ntBASIC2.58□□□□□ -2
CCNA1P78396 RNU6-1083P-201ENST00000384022 107 ntBASIC2.58□□□□□ -2
CCNA1P78396 RNU1-52P-201ENST00000384190 164 ntBASIC2.58□□□□□ -2
CCNA1P78396 AL109755.1-201ENST00000401791 649 ntBASIC2.58□□□□□ -2
CCNA1P78396 RNU2-42P-201ENST00000410697 113 ntBASIC2.58□□□□□ -2
CCNA1P78396 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.58□□□□□ -2
CCNA1P78396 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCNA1P78396 Z98742.2-201ENST00000431564 187 ntBASIC2.58□□□□□ -2
CCNA1P78396 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CCNA1P78396 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.58□□□□□ -2
CCNA1P78396 AC133134.1-201ENST00000466800 359 ntBASIC2.58□□□□□ -2
CCNA1P78396 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.58□□□□□ -2
CCNA1P78396 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCNA1P78396 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCNA1P78396 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.58□□□□□ -2
CCNA1P78396 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.58□□□□□ -2
CCNA1P78396 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.58□□□□□ -2
CCNA1P78396 MIR3670-2-201ENST00000582974 65 ntBASIC2.58□□□□□ -2
CCNA1P78396 MIR3670-1-201ENST00000584160 65 ntBASIC2.58□□□□□ -2
CCNA1P78396 MIR3670-3-201ENST00000584855 65 ntBASIC2.58□□□□□ -2
CCNA1P78396 AC008507.2-201ENST00000588402 1176 ntBASIC2.58□□□□□ -2
CCNA1P78396 OR10AB1P-201ENST00000609613 938 ntBASIC2.58□□□□□ -2
CCNA1P78396 MIR3670-4-201ENST00000612260 65 ntBASIC2.58□□□□□ -2
CCNA1P78396 MTND1P37-201ENST00000636562 264 ntBASIC2.58□□□□□ -2
CCNA1P78396 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCNA1P78396 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
CCNA1P78396 ZNF72P-201ENST00000425869 1908 ntBASIC2.58□□□□□ -2
CCNA1P78396 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.57□□□□□ -2
CCNA1P78396 SNORA64-201ENST00000384674 134 ntBASIC2.57□□□□□ -2
CCNA1P78396 RNU6-920P-201ENST00000410926 92 ntBASIC2.57□□□□□ -2
CCNA1P78396 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCNA1P78396 HMGB1P9-201ENST00000429856 646 ntBASIC2.57□□□□□ -2
CCNA1P78396 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.57□□□□□ -2
CCNA1P78396 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.57□□□□□ -2
CCNA1P78396 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.57□□□□□ -2
CCNA1P78396 GTF2IP7-202ENST00000436677 309 ntBASIC2.57□□□□□ -2
CCNA1P78396 AC018634.1-201ENST00000437554 401 ntBASIC2.57□□□□□ -2
CCNA1P78396 ARF4P4-201ENST00000439608 520 ntBASIC2.57□□□□□ -2
CCNA1P78396 AC002381.1-201ENST00000447049 280 ntBASIC2.57□□□□□ -2
CCNA1P78396 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.57□□□□□ -2
CCNA1P78396 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.57□□□□□ -2
CCNA1P78396 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.57□□□□□ -2
CCNA1P78396 TRBV1-201ENST00000476502 284 ntBASIC2.57□□□□□ -2
CCNA1P78396 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.57□□□□□ -2
CCNA1P78396 AC016550.1-201ENST00000505348 785 ntBASIC2.57□□□□□ -2
CCNA1P78396 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.57□□□□□ -2
CCNA1P78396 AC093677.1-201ENST00000514414 678 ntBASIC2.57□□□□□ -2
CCNA1P78396 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.57□□□□□ -2
CCNA1P78396 AC104072.1-201ENST00000568817 668 ntBASIC2.57□□□□□ -2
CCNA1P78396 AC002545.1-201ENST00000592511 181 ntBASIC2.57□□□□□ -2
CCNA1P78396 AL356575.1-201ENST00000603008 283 ntBASIC2.57□□□□□ -2
CCNA1P78396 AC021749.1-201ENST00000604322 607 ntBASIC2.57□□□□□ -2
CCNA1P78396 AL512427.1-201ENST00000618593 349 ntBASIC2.57□□□□□ -2
CCNA1P78396 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CCNA1P78396 AC009268.2-201ENST00000621925 457 ntBASIC2.57□□□□□ -2
CCNA1P78396 MIR6766-201ENST00000622641 72 ntBASIC2.57□□□□□ -2
CCNA1P78396 ZNF271P-202ENST00000465539 1970 ntBASIC2.57□□□□□ -2
CCNA1P78396 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.56□□□□□ -2
CCNA1P78396 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.56□□□□□ -2
CCNA1P78396 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCNA1P78396 RNU6-750P-201ENST00000390946 107 ntBASIC2.56□□□□□ -2
CCNA1P78396 TPMTP2-201ENST00000414372 726 ntBASIC2.56□□□□□ -2
CCNA1P78396 Z75741.2-201ENST00000417272 1167 ntBASIC2.56□□□□□ -2
CCNA1P78396 C1DP1-201ENST00000426049 402 ntBASIC2.56□□□□□ -2
CCNA1P78396 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.56□□□□□ -2
CCNA1P78396 PTGES3P1-201ENST00000439531 483 ntBASIC2.56□□□□□ -2
CCNA1P78396 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCNA1P78396 AC135721.1-201ENST00000497954 479 ntBASIC2.56□□□□□ -2
CCNA1P78396 HMGB1P28-201ENST00000507778 552 ntBASIC2.56□□□□□ -2
CCNA1P78396 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.56□□□□□ -2
CCNA1P78396 SCARNA17.1-201ENST00000516211 143 ntBASIC2.56□□□□□ -2
CCNA1P78396 SCARNA17.2-201ENST00000516334 143 ntBASIC2.56□□□□□ -2
CCNA1P78396 RNA5SP200-201ENST00000516360 103 ntBASIC2.56□□□□□ -2
CCNA1P78396 RNA5SP82-201ENST00000516707 92 ntBASIC2.56□□□□□ -2
CCNA1P78396 DEFB130C-202ENST00000530001 230 ntBASIC2.56□□□□□ -2
CCNA1P78396 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.56□□□□□ -2
CCNA1P78396 AC087897.1-201ENST00000550134 156 ntBASIC2.56□□□□□ -2
CCNA1P78396 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.56□□□□□ -2
CCNA1P78396 SCARNA17.4-201ENST00000614296 143 ntBASIC2.56□□□□□ -2
CCNA1P78396 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.56□□□□□ -2
CCNA1P78396 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CCNA1P78396 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CCNA1P78396 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCNA1P78396 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.55□□□□□ -2
CCNA1P78396 AL591416.1-201ENST00000404015 867 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms