Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AL162389.1-201ENST00000449233 177 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.46□□□□□ -1.7
HERVK_113P62684 AC004801.2-202ENST00000463559 283 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 RPS27AP1-201ENST00000475545 471 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 RN7SL432P-201ENST00000484057 298 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 AC106707.2-201ENST00000484182 374 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
HERVK_113P62684 AP005597.4-201ENST00000526762 229 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.46□□□□□ -1.7
HERVK_113P62684 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.46□□□□□ -1.7
HERVK_113P62684 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.46□□□□□ -1.7
HERVK_113P62684 MTCO3P13-201ENST00000577757 781 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 MIR3922-201ENST00000585192 84 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 AF038458.1-201ENST00000588406 262 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 AC022432.1-201ENST00000595739 310 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 AC104662.1-201ENST00000604448 511 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 AL022345.1-201ENST00000607292 135 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 U3.45-201ENST00000607547 219 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.46□□□□□ -1.7
HERVK_113P62684 uc_338.15-201ENST00000615470 191 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 SNHG22-203ENST00000617833 660 ntBASIC4.46□□□□□ -1.7
HERVK_113P62684 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.46□□□□□ -1.7
HERVK_113P62684 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.46□□□□□ -1.7
HERVK_113P62684 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
HERVK_113P62684 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HERVK_113P62684 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HERVK_113P62684 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HERVK_113P62684 RNU6-1249P-201ENST00000363237 111 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 RNU6-1284P-201ENST00000363701 100 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 Y_RNA.326-201ENST00000365176 113 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 RNU6-1013P-201ENST00000384180 107 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 RNU6-692P-201ENST00000384496 107 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 MIR483-201ENST00000385070 76 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HERVK_113P62684 SOD2P1-201ENST00000396543 562 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 RPL30P2-201ENST00000414021 291 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 RPS12P23-201ENST00000419579 400 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 AL353729.1-201ENST00000425044 720 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 RPL7P46-201ENST00000425129 740 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.45□□□□□ -1.7
HERVK_113P62684 MRPS18BP2-201ENST00000434310 759 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 FABP5P13-201ENST00000452144 328 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.45□□□□□ -1.7
HERVK_113P62684 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.45□□□□□ -1.7
HERVK_113P62684 RN7SL293P-201ENST00000481765 281 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.45□□□□□ -1.7
HERVK_113P62684 AC022695.1-201ENST00000522089 237 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.45□□□□□ -1.7
HERVK_113P62684 AC244505.7-201ENST00000599675 272 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.45□□□□□ -1.7
HERVK_113P62684 AL365204.3-201ENST00000612448 685 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 LINC00901.1-201ENST00000617252 152 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 RMST_9.1-201ENST00000619945 193 ntBASIC4.45□□□□□ -1.7
HERVK_113P62684 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.45□□□□□ -1.7
HERVK_113P62684 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.45□□□□□ -1.7
HERVK_113P62684 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.45□□□□□ -1.7
HERVK_113P62684 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HERVK_113P62684 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HERVK_113P62684 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HERVK_113P62684 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HERVK_113P62684 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HERVK_113P62684 RNU6-1252P-201ENST00000363054 104 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 RNA5SP72-201ENST00000364442 117 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 Y_RNA.414-201ENST00000384011 101 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 MIR135A2-201ENST00000384854 100 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.44□□□□□ -1.7
HERVK_113P62684 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.44□□□□□ -1.7
HERVK_113P62684 AC099677.1-201ENST00000420575 175 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AP000907.1-201ENST00000428428 510 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 MTCO3P45-201ENST00000443036 613 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 RPL29P29-201ENST00000448725 423 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AL162388.1-201ENST00000450912 352 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 snoU13.24-201ENST00000458998 104 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 RNU6-1208P-201ENST00000459588 107 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AC010631.1-201ENST00000474150 156 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 RPL7P23-201ENST00000493874 747 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.44□□□□□ -1.7
HERVK_113P62684 CCDC34P1-201ENST00000507441 517 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.44□□□□□ -1.7
HERVK_113P62684 AC100870.1-201ENST00000522035 505 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.44□□□□□ -1.7
HERVK_113P62684 AL137161.1-201ENST00000532231 390 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AC126177.3-201ENST00000551839 688 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.44□□□□□ -1.7
HERVK_113P62684 AL670379.6-201ENST00000603753 252 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AL670379.11-201ENST00000604059 253 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AC008162.1-201ENST00000604718 254 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AL670379.1-201ENST00000604752 252 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AL670379.5-201ENST00000605253 252 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AL670379.12-201ENST00000605291 253 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AL670379.8-201ENST00000605353 252 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AL670379.7-201ENST00000605823 252 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HERVK_113P62684 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.44□□□□□ -1.7
HERVK_113P62684 AC243312.2-201ENST00000623340 601 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AC110801.1-201ENST00000623590 212 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.44□□□□□ -1.7
HERVK_113P62684 AC027290.2-201ENST00000623210 18662 ntBASIC4.44□□□□□ -1.7
HERVK_113P62684 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.44□□□□□ -1.7
HERVK_113P62684 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms