Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A1P61619 AC016696.1-201ENST00000446949 318 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 MRPS31P2-201ENST00000451581 518 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 MTND3P16-201ENST00000452205 344 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 RPS24P6-201ENST00000452670 400 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 ANP32BP2-201ENST00000454525 545 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 snoU13.24-201ENST00000458998 104 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 GMFBP1-201ENST00000467831 427 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 RPL7P23-201ENST00000493874 747 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 RPL7P47-201ENST00000497299 556 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.26□□□□□ -1.89
SEC61A1P61619 SNORD60.2-201ENST00000516883 86 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 RNU6-1073P-201ENST00000517182 106 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 AC087369.1-201ENST00000520775 996 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.26□□□□□ -1.89
SEC61A1P61619 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.26□□□□□ -1.89
SEC61A1P61619 CBX3P7-201ENST00000532876 502 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.26□□□□□ -1.89
SEC61A1P61619 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.26□□□□□ -1.89
SEC61A1P61619 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.26□□□□□ -1.89
SEC61A1P61619 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
SEC61A1P61619 AC092628.2-201ENST00000622492 339 ntBASIC3.26□□□□□ -1.89
SEC61A1P61619 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.26□□□□□ -1.89
SEC61A1P61619 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.26□□□□□ -1.89
SEC61A1P61619 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SEC61A1P61619 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A1P61619 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.26□□□□□ -1.89
SEC61A1P61619 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A1P61619 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.26□□□□□ -1.89
SEC61A1P61619 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A1P61619 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SEC61A1P61619 MTND4P35-201ENST00000604257 1375 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SEC61A1P61619 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SEC61A1P61619 RNA5SP124-201ENST00000362739 110 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 Y_RNA.157-201ENST00000363638 102 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 RNU6-283P-201ENST00000364788 107 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 RNU5E-6P-201ENST00000365574 115 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
SEC61A1P61619 RNU6-1029P-201ENST00000384109 107 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 MT-TD-201ENST00000387419 68 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 SNORA48.7-201ENST00000391302 135 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AL109755.1-201ENST00000401791 649 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AL356432.1-201ENST00000405809 419 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 RNA5SP239-201ENST00000410218 129 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 BX323014.1-201ENST00000412876 237 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 EEF1A1P40-201ENST00000412883 573 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.25□□□□□ -1.89
SEC61A1P61619 AC008850.1-201ENST00000427546 362 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AC090774.1-201ENST00000435925 246 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 RPL35AP22-201ENST00000436855 335 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AC004866.2-201ENST00000438285 481 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 RPL7P12-201ENST00000446719 750 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AL118520.1-201ENST00000450770 291 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 RNU7-182P-201ENST00000459009 62 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 RPL21P11-201ENST00000461458 483 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.25□□□□□ -1.89
SEC61A1P61619 AC093278.1-201ENST00000494700 600 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 KLHL2P1-201ENST00000508691 521 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AC112206.3-201ENST00000514578 389 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 RN7SKP219-201ENST00000516825 296 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.25□□□□□ -1.89
SEC61A1P61619 AC109635.4-202ENST00000531666 412 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.25□□□□□ -1.89
SEC61A1P61619 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.25□□□□□ -1.89
SEC61A1P61619 FAM60BP-201ENST00000578364 658 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 MIR4775-201ENST00000581168 75 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 MIR4795-201ENST00000584182 89 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AP001330.4-201ENST00000604350 154 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AL121757.2-201ENST00000611223 313 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AC093838.1-201ENST00000613014 469 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AL603758.1-201ENST00000618654 241 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 AC009248.2-201ENST00000619826 254 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.25□□□□□ -1.89
SEC61A1P61619 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.25□□□□□ -1.89
SEC61A1P61619 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SEC61A1P61619 AC006026.1-201ENST00000444025 1803 ntBASIC3.25□□□□□ -1.89
SEC61A1P61619 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SEC61A1P61619 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SEC61A1P61619 AP001350.1-201ENST00000601906 1524 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SEC61A1P61619 AL365440.1-201ENST00000436135 2167 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SEC61A1P61619 RNU6-552P-201ENST00000362869 119 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 RNA5SP97-201ENST00000365006 84 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.24□□□□□ -1.89
SEC61A1P61619 Y_RNA.535-201ENST00000384612 99 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 MIR199A2-201ENST00000385289 110 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 RNU6-754P-201ENST00000391166 107 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 RN7SKP156-201ENST00000410308 342 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.24□□□□□ -1.89
SEC61A1P61619 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.24□□□□□ -1.89
SEC61A1P61619 EI24P1-201ENST00000416584 867 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.24□□□□□ -1.89
SEC61A1P61619 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.24□□□□□ -1.89
SEC61A1P61619 RPL35AP12-201ENST00000425362 338 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 MTCO1P39-201ENST00000426148 480 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 AC024082.2-201ENST00000434771 238 ntBASIC3.24□□□□□ -1.89
SEC61A1P61619 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.24□□□□□ -1.89
SEC61A1P61619 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms