Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.97□□□□□ -1.77
PER3P56645 AC022968.1-201ENST00000567372 442 ntBASIC3.97□□□□□ -1.77
PER3P56645 AC012182.1-201ENST00000570133 895 ntBASIC3.97□□□□□ -1.77
PER3P56645 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.97□□□□□ -1.77
PER3P56645 POLR3GP2-201ENST00000588366 668 ntBASIC3.97□□□□□ -1.77
PER3P56645 AC005255.1-201ENST00000593748 216 ntBASIC3.97□□□□□ -1.77
PER3P56645 BPIFA4P-203ENST00000603168 689 ntBASIC3.97□□□□□ -1.77
PER3P56645 AC104662.1-201ENST00000604448 511 ntBASIC3.97□□□□□ -1.77
PER3P56645 AC113139.1-201ENST00000605049 239 ntBASIC3.97□□□□□ -1.77
PER3P56645 MIR15A-201ENST00000607334 83 ntBASIC3.97□□□□□ -1.77
PER3P56645 uc_338.15-201ENST00000615470 191 ntBASIC3.97□□□□□ -1.77
PER3P56645 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.97□□□□□ -1.77
PER3P56645 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PER3P56645 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
PER3P56645 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PER3P56645 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.97□□□□□ -1.77
PER3P56645 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
PER3P56645 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PER3P56645 SDAD1P2-201ENST00000441308 2028 ntBASIC3.97□□□□□ -1.77
PER3P56645 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PER3P56645 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.97□□□□□ -1.77
PER3P56645 OR4G2P-202ENST00000641004 1759 ntBASIC3.97□□□□□ -1.77
PER3P56645 CPHL1P-201ENST00000461341 3407 ntBASIC3.96□□□□□ -1.77
PER3P56645 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
PER3P56645 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PER3P56645 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.96□□□□□ -1.78
PER3P56645 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PER3P56645 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PER3P56645 DEFB108F-201ENST00000344638 222 ntBASIC3.96□□□□□ -1.78
PER3P56645 RNU6-254P-201ENST00000363377 107 ntBASIC3.96□□□□□ -1.78
PER3P56645 RNU1-132P-201ENST00000364300 164 ntBASIC3.96□□□□□ -1.78
PER3P56645 Y_RNA.339-201ENST00000365325 102 ntBASIC3.96□□□□□ -1.78
PER3P56645 RNA5SP22-201ENST00000365393 109 ntBASIC3.96□□□□□ -1.78
PER3P56645 Y_RNA.399-201ENST00000383955 105 ntBASIC3.96□□□□□ -1.78
PER3P56645 RNU6-393P-201ENST00000384475 107 ntBASIC3.96□□□□□ -1.78
PER3P56645 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PER3P56645 RNA5SP219-201ENST00000390940 113 ntBASIC3.96□□□□□ -1.78
PER3P56645 RN7SKP177-201ENST00000410567 355 ntBASIC3.96□□□□□ -1.78
PER3P56645 AL513331.1-201ENST00000411908 397 ntBASIC3.96□□□□□ -1.78
PER3P56645 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.96□□□□□ -1.78
PER3P56645 EI24P1-201ENST00000416584 867 ntBASIC3.96□□□□□ -1.78
PER3P56645 AC091390.3-201ENST00000426478 338 ntBASIC3.96□□□□□ -1.78
PER3P56645 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.96□□□□□ -1.78
PER3P56645 RPL7P28-201ENST00000437739 740 ntBASIC3.96□□□□□ -1.78
PER3P56645 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.96□□□□□ -1.78
PER3P56645 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.96□□□□□ -1.78
PER3P56645 RNU6-953P-201ENST00000459154 107 ntBASIC3.96□□□□□ -1.78
PER3P56645 Y_RNA.632-201ENST00000459189 102 ntBASIC3.96□□□□□ -1.78
PER3P56645 RN7SL542P-201ENST00000467147 294 ntBASIC3.96□□□□□ -1.78
PER3P56645 AC012181.1-201ENST00000479895 423 ntBASIC3.96□□□□□ -1.78
PER3P56645 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.96□□□□□ -1.78
PER3P56645 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.96□□□□□ -1.78
PER3P56645 RN7SL812P-201ENST00000493791 279 ntBASIC3.96□□□□□ -1.78
PER3P56645 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.96□□□□□ -1.78
PER3P56645 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.96□□□□□ -1.78
PER3P56645 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.96□□□□□ -1.78
PER3P56645 AP000889.2-201ENST00000532684 490 ntBASIC3.96□□□□□ -1.78
PER3P56645 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.96□□□□□ -1.78
PER3P56645 AP000763.2-201ENST00000540641 163 ntBASIC3.96□□□□□ -1.78
PER3P56645 AC135001.1-201ENST00000544546 283 ntBASIC3.96□□□□□ -1.78
PER3P56645 MIR3672-201ENST00000584290 82 ntBASIC3.96□□□□□ -1.78
PER3P56645 AC020914.4-201ENST00000597690 277 ntBASIC3.96□□□□□ -1.78
PER3P56645 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.96□□□□□ -1.78
PER3P56645 AL355810.1-201ENST00000614629 552 ntBASIC3.96□□□□□ -1.78
PER3P56645 AC034102.8-201ENST00000615146 484 ntBASIC3.96□□□□□ -1.78
PER3P56645 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.96□□□□□ -1.78
PER3P56645 AL160413.1-201ENST00000622780 310 ntBASIC3.96□□□□□ -1.78
PER3P56645 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.96□□□□□ -1.78
PER3P56645 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PER3P56645 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.96□□□□□ -1.78
PER3P56645 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PER3P56645 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PER3P56645 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PER3P56645 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PER3P56645 AP001350.1-201ENST00000601906 1524 ntBASIC3.95□□□□□ -1.78
PER3P56645 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.95□□□□□ -1.78
PER3P56645 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
PER3P56645 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PER3P56645 AL161912.2-201ENST00000565707 3007 ntBASIC3.95□□□□□ -1.78
PER3P56645 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.95□□□□□ -1.78
PER3P56645 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.95□□□□□ -1.78
PER3P56645 Z82217.1-201ENST00000625157 8149 ntBASIC3.95□□□□□ -1.78
PER3P56645 SNORD113-7-201ENST00000363762 77 ntBASIC3.95□□□□□ -1.78
PER3P56645 RNU6-371P-201ENST00000364283 108 ntBASIC3.95□□□□□ -1.78
PER3P56645 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PER3P56645 Y_RNA.534-201ENST00000384599 112 ntBASIC3.95□□□□□ -1.78
PER3P56645 EIF4E2P1-201ENST00000393781 255 ntBASIC3.95□□□□□ -1.78
PER3P56645 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.95□□□□□ -1.78
PER3P56645 RNU4-14P-201ENST00000410858 122 ntBASIC3.95□□□□□ -1.78
PER3P56645 RPS20P14-201ENST00000412545 360 ntBASIC3.95□□□□□ -1.78
PER3P56645 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.95□□□□□ -1.78
PER3P56645 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.95□□□□□ -1.78
PER3P56645 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.95□□□□□ -1.78
PER3P56645 AL591704.1-201ENST00000432574 275 ntBASIC3.95□□□□□ -1.78
PER3P56645 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.95□□□□□ -1.78
PER3P56645 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.95□□□□□ -1.78
PER3P56645 TXNP1-201ENST00000441872 371 ntBASIC3.95□□□□□ -1.78
PER3P56645 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.95□□□□□ -1.78
PER3P56645 AP000926.1-201ENST00000479573 241 ntBASIC3.95□□□□□ -1.78
PER3P56645 AL592156.1-201ENST00000508758 304 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms