Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL513043.1-201ENST00000439124 535 ntBASIC2.91□□□□□ -1.94
VCPP55072 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.91□□□□□ -1.94
VCPP55072 snoU13.28-201ENST00000459235 104 ntBASIC2.91□□□□□ -1.94
VCPP55072 MTCYBP35-201ENST00000503630 1137 ntBASIC2.91□□□□□ -1.94
VCPP55072 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.91□□□□□ -1.94
VCPP55072 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.91□□□□□ -1.94
VCPP55072 AC022483.1-201ENST00000514020 567 ntBASIC2.91□□□□□ -1.94
VCPP55072 SNORA31.21-201ENST00000517180 77 ntBASIC2.91□□□□□ -1.94
VCPP55072 AC026241.1-201ENST00000517873 2142 ntBASIC2.91□□□□□ -1.94
VCPP55072 AP003497.1-201ENST00000528472 562 ntBASIC2.91□□□□□ -1.94
VCPP55072 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.91□□□□□ -1.94
VCPP55072 LRRC34P1-201ENST00000542742 915 ntBASIC2.91□□□□□ -1.94
VCPP55072 ZNF321P-202ENST00000550843 495 ntBASIC2.91□□□□□ -1.94
VCPP55072 AC027176.1-201ENST00000560204 514 ntBASIC2.91□□□□□ -1.94
VCPP55072 ISCA1P3-201ENST00000577104 373 ntBASIC2.91□□□□□ -1.94
VCPP55072 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.91□□□□□ -1.94
VCPP55072 AC005046.1-201ENST00000608515 625 ntBASIC2.91□□□□□ -1.94
VCPP55072 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.91□□□□□ -1.94
VCPP55072 AC079597.1-201ENST00000624306 508 ntBASIC2.91□□□□□ -1.94
VCPP55072 AC017037.3-201ENST00000625016 472 ntBASIC2.91□□□□□ -1.94
VCPP55072 AC099063.3-201ENST00000642066 185 ntBASIC2.91□□□□□ -1.94
VCPP55072 AL161431.1-201ENST00000618966 4205 ntBASIC2.91□□□□□ -1.94
VCPP55072 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
VCPP55072 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.91□□□□□ -1.94
VCPP55072 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.91□□□□□ -1.94
VCPP55072 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
VCPP55072 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
VCPP55072 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
VCPP55072 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.9□□□□□ -1.95
VCPP55072 MTCO1P17-201ENST00000411522 491 ntBASIC2.9□□□□□ -1.95
VCPP55072 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.9□□□□□ -1.95
VCPP55072 MTND1P20-201ENST00000430341 950 ntBASIC2.9□□□□□ -1.95
VCPP55072 AP000542.1-201ENST00000448473 371 ntBASIC2.9□□□□□ -1.95
VCPP55072 AC103975.1-201ENST00000482506 483 ntBASIC2.9□□□□□ -1.95
VCPP55072 RN7SL297P-201ENST00000483161 293 ntBASIC2.9□□□□□ -1.95
VCPP55072 RPL30P5-201ENST00000494923 336 ntBASIC2.9□□□□□ -1.95
VCPP55072 LTV1P1-201ENST00000510683 1237 ntBASIC2.9□□□□□ -1.95
VCPP55072 MTND5P4-201ENST00000514978 288 ntBASIC2.9□□□□□ -1.95
VCPP55072 IGKV3-31-201ENST00000523109 329 ntBASIC2.9□□□□□ -1.95
VCPP55072 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.9□□□□□ -1.95
VCPP55072 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VCPP55072 ACTR3BP3-201ENST00000565577 979 ntBASIC2.9□□□□□ -1.95
VCPP55072 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.9□□□□□ -1.95
VCPP55072 AP001429.1-201ENST00000602568 530 ntBASIC2.9□□□□□ -1.95
VCPP55072 AL158211.4-201ENST00000606988 584 ntBASIC2.9□□□□□ -1.95
VCPP55072 AC097468.3-201ENST00000607956 456 ntBASIC2.9□□□□□ -1.95
VCPP55072 AL359198.2-201ENST00000611836 194 ntBASIC2.9□□□□□ -1.95
VCPP55072 AC068880.5-201ENST00000624331 290 ntBASIC2.9□□□□□ -1.95
VCPP55072 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.95
VCPP55072 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
VCPP55072 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.89□□□□□ -1.95
VCPP55072 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VCPP55072 MIR26A1-201ENST00000362205 77 ntBASIC2.89□□□□□ -1.95
VCPP55072 Y_RNA.18-201ENST00000362461 102 ntBASIC2.89□□□□□ -1.95
VCPP55072 TAS2R15P-201ENST00000390674 928 ntBASIC2.89□□□□□ -1.95
VCPP55072 AL590084.2-201ENST00000401481 382 ntBASIC2.89□□□□□ -1.95
VCPP55072 AL356057.2-201ENST00000403318 432 ntBASIC2.89□□□□□ -1.95
VCPP55072 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.89□□□□□ -1.95
VCPP55072 RPS3AP24-201ENST00000407896 734 ntBASIC2.89□□□□□ -1.95
VCPP55072 MIR1290-201ENST00000408735 78 ntBASIC2.89□□□□□ -1.95
VCPP55072 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.89□□□□□ -1.95
VCPP55072 AC009963.1-201ENST00000417265 157 ntBASIC2.89□□□□□ -1.95
VCPP55072 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.89□□□□□ -1.95
VCPP55072 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.89□□□□□ -1.95
VCPP55072 OR4K11P-201ENST00000431829 904 ntBASIC2.89□□□□□ -1.95
VCPP55072 RPL26P6-201ENST00000440913 438 ntBASIC2.89□□□□□ -1.95
VCPP55072 RPL7P12-201ENST00000446719 750 ntBASIC2.89□□□□□ -1.95
VCPP55072 AC092798.1-201ENST00000458542 409 ntBASIC2.89□□□□□ -1.95
VCPP55072 RPL9P33-201ENST00000484311 566 ntBASIC2.89□□□□□ -1.95
VCPP55072 LINC00888-204ENST00000487386 421 ntBASIC2.89□□□□□ -1.95
VCPP55072 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.89□□□□□ -1.95
VCPP55072 AC117522.3-201ENST00000507974 584 ntBASIC2.89□□□□□ -1.95
VCPP55072 MTCO1P47-201ENST00000523889 1271 ntBASIC2.89□□□□□ -1.95
VCPP55072 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.89□□□□□ -1.95
VCPP55072 AP003122.3-201ENST00000526316 255 ntBASIC2.89□□□□□ -1.95
VCPP55072 AL133271.1-201ENST00000538229 291 ntBASIC2.89□□□□□ -1.95
VCPP55072 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.89□□□□□ -1.95
VCPP55072 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VCPP55072 AL355836.1-201ENST00000555951 870 ntBASIC2.89□□□□□ -1.95
VCPP55072 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.89□□□□□ -1.95
VCPP55072 AC002400.1-201ENST00000569310 726 ntBASIC2.89□□□□□ -1.95
VCPP55072 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.89□□□□□ -1.95
VCPP55072 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.89□□□□□ -1.95
VCPP55072 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.89□□□□□ -1.95
VCPP55072 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.89□□□□□ -1.95
VCPP55072 AP000811.1-201ENST00000603803 651 ntBASIC2.89□□□□□ -1.95
VCPP55072 AC018714.1-201ENST00000605028 208 ntBASIC2.89□□□□□ -1.95
VCPP55072 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.89□□□□□ -1.95
VCPP55072 MIR6130-201ENST00000619419 109 ntBASIC2.89□□□□□ -1.95
VCPP55072 AL031667.3-201ENST00000620124 655 ntBASIC2.89□□□□□ -1.95
VCPP55072 AC092608.2-201ENST00000624427 218 ntBASIC2.89□□□□□ -1.95
VCPP55072 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.89□□□□□ -1.95
VCPP55072 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.89□□□□□ -1.95
VCPP55072 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
VCPP55072 AC241585.2-209ENST00000638217 143 ntBASIC2.89□□□□□ -1.95
VCPP55072 AC010680.1-201ENST00000590024 3590 ntBASIC2.89□□□□□ -1.95
VCPP55072 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
VCPP55072 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VCPP55072 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
VCPP55072 RNU6-853P-201ENST00000364306 107 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms