Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.18□□□□□ -1.42
NUBP1P53384 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.18□□□□□ -1.42
NUBP1P53384 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.18□□□□□ -1.42
NUBP1P53384 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NUBP1P53384 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
NUBP1P53384 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NUBP1P53384 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUBP1P53384 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.17□□□□□ -1.42
NUBP1P53384 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUBP1P53384 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.17□□□□□ -1.42
NUBP1P53384 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.17□□□□□ -1.42
NUBP1P53384 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUBP1P53384 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.17□□□□□ -1.42
NUBP1P53384 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUBP1P53384 RN7SKP186-201ENST00000365371 303 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 Y_RNA.348-201ENST00000365403 103 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 Y_RNA.361-201ENST00000365515 120 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 RNU6-19P-201ENST00000384718 107 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 AL590762.2-201ENST00000395798 571 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 BX510359.2-201ENST00000417920 305 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.17□□□□□ -1.42
NUBP1P53384 AL139281.1-201ENST00000422120 335 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC6.17□□□□□ -1.42
NUBP1P53384 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.17□□□□□ -1.42
NUBP1P53384 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC6.17□□□□□ -1.42
NUBP1P53384 RPS4XP2-201ENST00000458402 793 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 AC117454.1-201ENST00000491120 168 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 AIG1P1-201ENST00000503376 148 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 AC006445.2-201ENST00000510061 472 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.17□□□□□ -1.42
NUBP1P53384 RNU7-115P-201ENST00000516433 55 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC6.17□□□□□ -1.42
NUBP1P53384 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC6.17□□□□□ -1.42
NUBP1P53384 AC108738.1-201ENST00000603703 237 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 TCL6_2.1-201ENST00000615162 119 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 AL023881.1-201ENST00000621088 301 ntBASIC6.17□□□□□ -1.42
NUBP1P53384 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.17□□□□□ -1.42
NUBP1P53384 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NUBP1P53384 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NUBP1P53384 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUBP1P53384 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUBP1P53384 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUBP1P53384 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC6.17□□□□□ -1.42
NUBP1P53384 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
NUBP1P53384 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NUBP1P53384 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.16□□□□□ -1.42
NUBP1P53384 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUBP1P53384 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NUBP1P53384 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NUBP1P53384 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
NUBP1P53384 RNA5SP350-201ENST00000363298 111 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 RNU1-64P-201ENST00000365443 163 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 RNU1-46P-201ENST00000384425 164 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 RNU2-55P-201ENST00000411146 174 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 NDUFS5P4-201ENST00000412983 318 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 HMGA1P8-201ENST00000414130 321 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 AC007568.1-201ENST00000422912 471 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 AC113412.1-201ENST00000425840 504 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 RPL39P40-201ENST00000445481 146 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 AC114728.1-201ENST00000488289 483 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 AC108022.1-201ENST00000493466 478 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 RNU6-781P-201ENST00000516377 101 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 RNU1-117P-201ENST00000517041 158 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.16□□□□□ -1.42
NUBP1P53384 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC6.16□□□□□ -1.42
NUBP1P53384 AL049872.1-201ENST00000556323 322 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.16□□□□□ -1.42
NUBP1P53384 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.16□□□□□ -1.42
NUBP1P53384 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
NUBP1P53384 Mico1.1-201ENST00000611698 204 ntBASIC6.16□□□□□ -1.42
NUBP1P53384 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.16□□□□□ -1.42
NUBP1P53384 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.16□□□□□ -1.42
NUBP1P53384 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC6.16□□□□□ -1.42
NUBP1P53384 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
NUBP1P53384 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUBP1P53384 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUBP1P53384 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NUBP1P53384 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NUBP1P53384 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
NUBP1P53384 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
NUBP1P53384 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
NUBP1P53384 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NUBP1P53384 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NUBP1P53384 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NUBP1P53384 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NUBP1P53384 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.15□□□□□ -1.42
NUBP1P53384 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
NUBP1P53384 AC093278.2-201ENST00000564956 2485 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 AC062022.1-201ENST00000451026 1684 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
NUBP1P53384 RNU6-766P-201ENST00000362478 107 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 AP002088.1-201ENST00000382740 395 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 MIRLET7F2-201ENST00000385277 83 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 RNA5SP496-201ENST00000391240 109 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 RNU6-554P-201ENST00000410466 106 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms