Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SNORA70B-201ENST00000384210 135 ntBASIC2.01□□□□□ -2.09
RPA3P35244 RNU6-253P-201ENST00000384730 105 ntBASIC2.01□□□□□ -2.09
RPA3P35244 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
RPA3P35244 RPL23AP29-201ENST00000397284 453 ntBASIC2.01□□□□□ -2.09
RPA3P35244 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.01□□□□□ -2.09
RPA3P35244 RNU4-72P-201ENST00000410754 173 ntBASIC2.01□□□□□ -2.09
RPA3P35244 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.01□□□□□ -2.09
RPA3P35244 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.01□□□□□ -2.09
RPA3P35244 SEPT2P1-201ENST00000419651 180 ntBASIC2.01□□□□□ -2.09
RPA3P35244 BX119904.4-201ENST00000424402 301 ntBASIC2.01□□□□□ -2.09
RPA3P35244 C1DP1-201ENST00000426049 402 ntBASIC2.01□□□□□ -2.09
RPA3P35244 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.01□□□□□ -2.09
RPA3P35244 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.01□□□□□ -2.09
RPA3P35244 AC002381.1-201ENST00000447049 280 ntBASIC2.01□□□□□ -2.09
RPA3P35244 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.01□□□□□ -2.09
RPA3P35244 RPL26P9-201ENST00000457466 433 ntBASIC2.01□□□□□ -2.09
RPA3P35244 AL121769.1-201ENST00000469473 401 ntBASIC2.01□□□□□ -2.09
RPA3P35244 COL6A4P2-205ENST00000509855 506 ntBASIC2.01□□□□□ -2.09
RPA3P35244 RNU5F-8P-201ENST00000515941 111 ntBASIC2.01□□□□□ -2.09
RPA3P35244 RNA5SP291-201ENST00000517222 105 ntBASIC2.01□□□□□ -2.09
RPA3P35244 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.01□□□□□ -2.09
RPA3P35244 AC104417.1-201ENST00000523974 751 ntBASIC2.01□□□□□ -2.09
RPA3P35244 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.01□□□□□ -2.09
RPA3P35244 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.01□□□□□ -2.09
RPA3P35244 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.01□□□□□ -2.09
RPA3P35244 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.01□□□□□ -2.09
RPA3P35244 AC136601.2-201ENST00000604356 474 ntBASIC2.01□□□□□ -2.09
RPA3P35244 APOOP1-201ENST00000604695 592 ntBASIC2.01□□□□□ -2.09
RPA3P35244 SNORD14A-201ENST00000606526 91 ntBASIC2.01□□□□□ -2.09
RPA3P35244 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.01□□□□□ -2.09
RPA3P35244 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.01□□□□□ -2.09
RPA3P35244 AC245884.12-201ENST00000615364 59 ntBASIC2.01□□□□□ -2.09
RPA3P35244 AL136981.2-201ENST00000617319 734 ntBASIC2.01□□□□□ -2.09
RPA3P35244 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
RPA3P35244 MIR219B-201ENST00000637023 88 ntBASIC2.01□□□□□ -2.09
RPA3P35244 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.01□□□□□ -2.09
RPA3P35244 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
RPA3P35244 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.01□□□□□ -2.09
RPA3P35244 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPA3P35244 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.01□□□□□ -2.09
RPA3P35244 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
RPA3P35244 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2□□□□□ -2.09
RPA3P35244 SNORA3A-201ENST00000364113 130 ntBASIC2□□□□□ -2.09
RPA3P35244 RNU6-343P-201ENST00000364709 104 ntBASIC2□□□□□ -2.09
RPA3P35244 SNORA67.3-201ENST00000384366 140 ntBASIC2□□□□□ -2.09
RPA3P35244 RPL7P27-201ENST00000403775 720 ntBASIC2□□□□□ -2.09
RPA3P35244 AL023284.1-201ENST00000403956 276 ntBASIC2□□□□□ -2.09
RPA3P35244 RNU2-33P-201ENST00000410344 192 ntBASIC2□□□□□ -2.09
RPA3P35244 AL161449.1-201ENST00000414531 1199 ntBASIC2□□□□□ -2.09
RPA3P35244 AL109913.1-201ENST00000421173 514 ntBASIC2□□□□□ -2.09
RPA3P35244 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2□□□□□ -2.09
RPA3P35244 ZNF736P7Y-201ENST00000425158 820 ntBASIC2□□□□□ -2.09
RPA3P35244 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2□□□□□ -2.09
RPA3P35244 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2□□□□□ -2.09
RPA3P35244 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2□□□□□ -2.09
RPA3P35244 ANKRD26P4-201ENST00000455755 950 ntBASIC2□□□□□ -2.09
RPA3P35244 ATG12P2-201ENST00000456830 416 ntBASIC2□□□□□ -2.09
RPA3P35244 snoU13.8-201ENST00000458890 104 ntBASIC2□□□□□ -2.09
RPA3P35244 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
RPA3P35244 AC114981.1-201ENST00000503897 678 ntBASIC2□□□□□ -2.09
RPA3P35244 AC098591.2-201ENST00000510152 315 ntBASIC2□□□□□ -2.09
RPA3P35244 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2□□□□□ -2.09
RPA3P35244 NRON-201ENST00000517270 370 ntBASIC2□□□□□ -2.09
RPA3P35244 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2□□□□□ -2.09
RPA3P35244 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2□□□□□ -2.09
RPA3P35244 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2□□□□□ -2.09
RPA3P35244 OR11H5P-201ENST00000554039 926 ntBASIC2□□□□□ -2.09
RPA3P35244 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2□□□□□ -2.09
RPA3P35244 MIR5089-201ENST00000580047 84 ntBASIC2□□□□□ -2.09
RPA3P35244 MIR4648-201ENST00000580107 72 ntBASIC2□□□□□ -2.09
RPA3P35244 AC120053.1-201ENST00000607706 736 ntBASIC2□□□□□ -2.09
RPA3P35244 AC013412.1-201ENST00000610687 192 ntBASIC2□□□□□ -2.09
RPA3P35244 AC013476.2-201ENST00000614456 459 ntBASIC2□□□□□ -2.09
RPA3P35244 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2□□□□□ -2.09
RPA3P35244 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
RPA3P35244 AC104454.1-201ENST00000421341 1401 ntBASIC2□□□□□ -2.09
RPA3P35244 Z82209.1-201ENST00000422141 2135 ntBASIC1.99□□□□□ -2.09
RPA3P35244 RNU5B-4P-201ENST00000363508 111 ntBASIC1.99□□□□□ -2.09
RPA3P35244 SNORA23-201ENST00000365128 182 ntBASIC1.99□□□□□ -2.09
RPA3P35244 RNU6-750P-201ENST00000390946 107 ntBASIC1.99□□□□□ -2.09
RPA3P35244 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
RPA3P35244 TPMTP2-201ENST00000414372 726 ntBASIC1.99□□□□□ -2.09
RPA3P35244 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPA3P35244 Z98742.2-201ENST00000431564 187 ntBASIC1.99□□□□□ -2.09
RPA3P35244 USP9YP22-201ENST00000438971 294 ntBASIC1.99□□□□□ -2.09
RPA3P35244 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.99□□□□□ -2.09
RPA3P35244 RPL30P9-201ENST00000465586 330 ntBASIC1.99□□□□□ -2.09
RPA3P35244 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.99□□□□□ -2.09
RPA3P35244 AC093801.2-201ENST00000503966 1050 ntBASIC1.99□□□□□ -2.09
RPA3P35244 HMGB1P28-201ENST00000507778 552 ntBASIC1.99□□□□□ -2.09
RPA3P35244 AC023141.11-201ENST00000508864 202 ntBASIC1.99□□□□□ -2.09
RPA3P35244 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.99□□□□□ -2.09
RPA3P35244 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.99□□□□□ -2.09
RPA3P35244 HMGN1P28-201ENST00000521340 364 ntBASIC1.99□□□□□ -2.09
RPA3P35244 IGKV3-31-201ENST00000523109 329 ntBASIC1.99□□□□□ -2.09
RPA3P35244 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.99□□□□□ -2.09
RPA3P35244 SLC2A13P1-201ENST00000531560 322 ntBASIC1.99□□□□□ -2.09
RPA3P35244 HIGD1AP17-201ENST00000554576 276 ntBASIC1.99□□□□□ -2.09
RPA3P35244 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.99□□□□□ -2.09
RPA3P35244 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms