Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 RPL17P49-201ENST00000443728 411 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC9P31274 AL033528.1-201ENST00000453780 140 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC9P31274 snoU109.1-201ENST00000459339 135 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 RPL23AP62-201ENST00000463396 453 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC9P31274 AC091435.1-201ENST00000505442 584 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 ARL2BPP4-201ENST00000506854 471 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.52□□□□□ -1.85
HOXC9P31274 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC9P31274 AC008413.1-201ENST00000511864 177 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 RNA5SP320-201ENST00000516263 124 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 RNU6-201P-201ENST00000517100 61 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 RPL7P20-201ENST00000520308 745 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AP003181.2-201ENST00000528941 181 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC9P31274 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.52□□□□□ -1.85
HOXC9P31274 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.52□□□□□ -1.85
HOXC9P31274 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC9P31274 RPL21P5-201ENST00000554662 472 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 OR4T1P-201ENST00000554933 911 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.52□□□□□ -1.85
HOXC9P31274 FAM60BP-201ENST00000578364 658 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 MIR3605-201ENST00000583214 100 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 HMGN1P30-201ENST00000589286 268 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC9P31274 AC121334.2-201ENST00000605387 271 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AC006023.2-201ENST00000609916 167 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AP000254.1-201ENST00000609934 520 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AL590282.1-201ENST00000610379 1136 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 AC131902.3-201ENST00000611767 581 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC9P31274 HULC.1-201ENST00000612720 240 ntBASIC3.52□□□□□ -1.85
HOXC9P31274 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.52□□□□□ -1.85
HOXC9P31274 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HOXC9P31274 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HOXC9P31274 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
HOXC9P31274 RNY4P34-201ENST00000364779 95 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXC9P31274 RNU6-637P-201ENST00000384050 107 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 SNORD115.1-201ENST00000391109 76 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 RPS3AP3-201ENST00000411933 242 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 CDK8P2-201ENST00000415020 547 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC9P31274 AL353777.1-201ENST00000425552 326 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC9P31274 VDAC1P3-201ENST00000434069 851 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC9P31274 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.51□□□□□ -1.85
HOXC9P31274 RPS24P6-201ENST00000452670 400 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 MTND1P3-201ENST00000484956 952 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC9P31274 AC008549.1-201ENST00000512900 643 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 Y_RNA.655-201ENST00000515919 96 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 RN7SKP244-201ENST00000516513 307 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC9P31274 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.51□□□□□ -1.85
HOXC9P31274 AC243972.3-201ENST00000539655 198 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AC012213.3-201ENST00000577199 777 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AP001330.4-201ENST00000604350 154 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AC098614.4-201ENST00000607601 462 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AC007038.2-201ENST00000608095 740 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AC103710.3-201ENST00000608157 948 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AC008498.1-201ENST00000613012 531 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AL450472.3-201ENST00000615578 367 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AC009509.4-201ENST00000619202 509 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AC009268.2-201ENST00000621925 457 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 AC110994.2-201ENST00000635481 492 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 MIR7153-201ENST00000637758 57 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC9P31274 AC093908.1-201ENST00000623125 8092 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HOXC9P31274 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.51□□□□□ -1.85
HOXC9P31274 AC005183.1-201ENST00000603687 1979 ntBASIC3.51□□□□□ -1.85
HOXC9P31274 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HOXC9P31274 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
HOXC9P31274 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC9P31274 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HOXC9P31274 RPL9P7-201ENST00000330965 580 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 RNU6-623P-201ENST00000363143 105 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 RNU6-432P-201ENST00000384196 109 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 RNU6-348P-201ENST00000384386 107 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 MIR19A-201ENST00000384878 82 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 RPS3AP36-201ENST00000398190 775 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC9P31274 RPLP0P7-201ENST00000416050 667 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 AC004866.2-201ENST00000438285 481 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 MTND1P9-201ENST00000453775 944 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.5□□□□□ -1.85
HOXC9P31274 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC9P31274 snoU13.4-201ENST00000458916 104 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 SNORD42A-201ENST00000459584 64 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 VN1R17P-201ENST00000472048 1090 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 RPL23AP41-201ENST00000484754 458 ntBASIC3.5□□□□□ -1.85
HOXC9P31274 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC9P31274 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.5□□□□□ -1.85
HOXC9P31274 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.5□□□□□ -1.85
HOXC9P31274 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms