Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RPL21P8-201ENST00000465083 535 ntBASIC5.31□□□□□ -1.56
RXRBP28702 AC021382.1-201ENST00000483523 359 ntBASIC5.31□□□□□ -1.56
RXRBP28702 RPL22P13-201ENST00000493291 347 ntBASIC5.31□□□□□ -1.56
RXRBP28702 RNU6-406P-201ENST00000516470 107 ntBASIC5.31□□□□□ -1.56
RXRBP28702 Y_RNA.721-201ENST00000517207 102 ntBASIC5.31□□□□□ -1.56
RXRBP28702 LSM6P2-201ENST00000552208 177 ntBASIC5.31□□□□□ -1.56
RXRBP28702 LARP7P3-201ENST00000579888 337 ntBASIC5.31□□□□□ -1.56
RXRBP28702 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.31□□□□□ -1.56
RXRBP28702 AC091167.4-201ENST00000605079 184 ntBASIC5.31□□□□□ -1.56
RXRBP28702 AL596245.1-201ENST00000618994 362 ntBASIC5.31□□□□□ -1.56
RXRBP28702 AL138713.1-201ENST00000624026 2130 ntBASIC5.31□□□□□ -1.56
RXRBP28702 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RXRBP28702 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RXRBP28702 Z95331.1-201ENST00000623075 23112 ntBASIC5.31□□□□□ -1.56
RXRBP28702 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RXRBP28702 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RXRBP28702 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RXRBP28702 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RXRBP28702 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RXRBP28702 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RXRBP28702 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RXRBP28702 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.3□□□□□ -1.56
RXRBP28702 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RXRBP28702 PHKBP1-201ENST00000450951 1951 ntBASIC5.3□□□□□ -1.56
RXRBP28702 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RXRBP28702 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RXRBP28702 RNA5SP258-201ENST00000362750 119 ntBASIC5.3□□□□□ -1.56
RXRBP28702 RNU1-35P-201ENST00000362782 153 ntBASIC5.3□□□□□ -1.56
RXRBP28702 Y_RNA.404-201ENST00000383978 102 ntBASIC5.3□□□□□ -1.56
RXRBP28702 RNU6-641P-201ENST00000384006 107 ntBASIC5.3□□□□□ -1.56
RXRBP28702 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.3□□□□□ -1.56
RXRBP28702 RPL21P91-201ENST00000429231 479 ntBASIC5.3□□□□□ -1.56
RXRBP28702 PCNPP5-201ENST00000452246 481 ntBASIC5.3□□□□□ -1.56
RXRBP28702 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.3□□□□□ -1.56
RXRBP28702 AC004801.2-202ENST00000463559 283 ntBASIC5.3□□□□□ -1.56
RXRBP28702 AC008526.1-201ENST00000509149 338 ntBASIC5.3□□□□□ -1.56
RXRBP28702 Y_RNA.661-201ENST00000516003 99 ntBASIC5.3□□□□□ -1.56
RXRBP28702 RNU6-1143P-201ENST00000516125 104 ntBASIC5.3□□□□□ -1.56
RXRBP28702 SETP2-201ENST00000553886 926 ntBASIC5.3□□□□□ -1.56
RXRBP28702 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.3□□□□□ -1.56
RXRBP28702 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.3□□□□□ -1.56
RXRBP28702 AC012493.2-201ENST00000595083 291 ntBASIC5.3□□□□□ -1.56
RXRBP28702 AC092747.3-201ENST00000603769 301 ntBASIC5.3□□□□□ -1.56
RXRBP28702 AC023813.4-201ENST00000607580 580 ntBASIC5.3□□□□□ -1.56
RXRBP28702 AC100812.1-201ENST00000607622 580 ntBASIC5.3□□□□□ -1.56
RXRBP28702 AC011890.2-201ENST00000613393 294 ntBASIC5.3□□□□□ -1.56
RXRBP28702 AL355365.1-201ENST00000616480 294 ntBASIC5.3□□□□□ -1.56
RXRBP28702 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.3□□□□□ -1.56
RXRBP28702 U2.22-201ENST00000636441 106 ntBASIC5.3□□□□□ -1.56
RXRBP28702 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RXRBP28702 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RXRBP28702 AL365361.1-201ENST00000566942 3481 ntBASIC5.3□□□□□ -1.56
RXRBP28702 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.3□□□□□ -1.56
RXRBP28702 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RXRBP28702 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.3□□□□□ -1.56
RXRBP28702 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.3□□□□□ -1.56
RXRBP28702 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RXRBP28702 AC058791.1-201ENST00000608412 3198 ntBASIC5.3□□□□□ -1.56
RXRBP28702 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.3□□□□□ -1.56
RXRBP28702 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RXRBP28702 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
RXRBP28702 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RXRBP28702 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RXRBP28702 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.29□□□□□ -1.56
RXRBP28702 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RXRBP28702 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RXRBP28702 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
RXRBP28702 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.29□□□□□ -1.56
RXRBP28702 SNORD3E-201ENST00000362899 217 ntBASIC5.29□□□□□ -1.56
RXRBP28702 RNU6-593P-201ENST00000364716 112 ntBASIC5.29□□□□□ -1.56
RXRBP28702 Y_RNA.396-201ENST00000383949 103 ntBASIC5.29□□□□□ -1.56
RXRBP28702 U1.1-201ENST00000384101 164 ntBASIC5.29□□□□□ -1.56
RXRBP28702 Y_RNA.447-201ENST00000384184 113 ntBASIC5.29□□□□□ -1.56
RXRBP28702 EIF4E2P1-201ENST00000393781 255 ntBASIC5.29□□□□□ -1.56
RXRBP28702 AL139095.1-201ENST00000404326 391 ntBASIC5.29□□□□□ -1.56
RXRBP28702 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.29□□□□□ -1.56
RXRBP28702 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.29□□□□□ -1.56
RXRBP28702 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.29□□□□□ -1.56
RXRBP28702 CKS1BP6-201ENST00000424932 240 ntBASIC5.29□□□□□ -1.56
RXRBP28702 AC009965.2-201ENST00000425328 970 ntBASIC5.29□□□□□ -1.56
RXRBP28702 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.29□□□□□ -1.56
RXRBP28702 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.29□□□□□ -1.56
RXRBP28702 RPS26P56-201ENST00000444468 240 ntBASIC5.29□□□□□ -1.56
RXRBP28702 AL591623.2-201ENST00000449978 222 ntBASIC5.29□□□□□ -1.56
RXRBP28702 AP001992.1-205ENST00000462248 379 ntBASIC5.29□□□□□ -1.56
RXRBP28702 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.29□□□□□ -1.56
RXRBP28702 Y_RNA.680-201ENST00000516441 93 ntBASIC5.29□□□□□ -1.56
RXRBP28702 RNU6-699P-201ENST00000517081 110 ntBASIC5.29□□□□□ -1.56
RXRBP28702 AC011979.2-201ENST00000527568 352 ntBASIC5.29□□□□□ -1.56
RXRBP28702 AC135001.1-201ENST00000544546 283 ntBASIC5.29□□□□□ -1.56
RXRBP28702 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.29□□□□□ -1.56
RXRBP28702 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.29□□□□□ -1.56
RXRBP28702 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.29□□□□□ -1.56
RXRBP28702 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.29□□□□□ -1.56
RXRBP28702 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.29□□□□□ -1.56
RXRBP28702 AC025627.2-201ENST00000576220 160 ntBASIC5.29□□□□□ -1.56
RXRBP28702 RPL23AP92-201ENST00000603609 255 ntBASIC5.29□□□□□ -1.56
RXRBP28702 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.29□□□□□ -1.56
RXRBP28702 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.29□□□□□ -1.56
RXRBP28702 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms