Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RB1P06400 RNU6-741P-201ENST00000383889 107 ntBASIC3.36□□□□□ -1.87
RB1P06400 SNORA40.3-201ENST00000390964 122 ntBASIC3.36□□□□□ -1.87
RB1P06400 MRPL42P2-201ENST00000403169 426 ntBASIC3.36□□□□□ -1.87
RB1P06400 RNU6-1077P-201ENST00000410506 102 ntBASIC3.36□□□□□ -1.87
RB1P06400 RPS3AP3-201ENST00000411933 242 ntBASIC3.36□□□□□ -1.87
RB1P06400 EEF1A1P41-201ENST00000414667 207 ntBASIC3.36□□□□□ -1.87
RB1P06400 Z85995.1-201ENST00000415547 335 ntBASIC3.36□□□□□ -1.87
RB1P06400 AL356968.1-201ENST00000416622 474 ntBASIC3.36□□□□□ -1.87
RB1P06400 RPL31P12-201ENST00000422587 358 ntBASIC3.36□□□□□ -1.87
RB1P06400 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.36□□□□□ -1.87
RB1P06400 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.36□□□□□ -1.87
RB1P06400 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.36□□□□□ -1.87
RB1P06400 SETP8-201ENST00000435341 628 ntBASIC3.36□□□□□ -1.87
RB1P06400 MTATP6P30-201ENST00000443540 664 ntBASIC3.36□□□□□ -1.87
RB1P06400 RPS20P22-201ENST00000473700 357 ntBASIC3.36□□□□□ -1.87
RB1P06400 Y_RNA.672-201ENST00000516289 104 ntBASIC3.36□□□□□ -1.87
RB1P06400 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.36□□□□□ -1.87
RB1P06400 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.36□□□□□ -1.87
RB1P06400 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.36□□□□□ -1.87
RB1P06400 AC005771.1-201ENST00000585581 349 ntBASIC3.36□□□□□ -1.87
RB1P06400 AC002545.1-201ENST00000592511 181 ntBASIC3.36□□□□□ -1.87
RB1P06400 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.36□□□□□ -1.87
RB1P06400 RMST_8.1-201ENST00000610287 165 ntBASIC3.36□□□□□ -1.87
RB1P06400 AC131902.3-201ENST00000611767 581 ntBASIC3.36□□□□□ -1.87
RB1P06400 uc_338.25-201ENST00000613756 156 ntBASIC3.36□□□□□ -1.87
RB1P06400 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RB1P06400 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RB1P06400 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RB1P06400 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RB1P06400 AC007785.2-201ENST00000598627 1916 ntBASIC3.35□□□□□ -1.87
RB1P06400 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RB1P06400 TPTE2P4-201ENST00000258589 1605 ntBASIC3.35□□□□□ -1.87
RB1P06400 RNU4-1-201ENST00000363925 141 ntBASIC3.35□□□□□ -1.87
RB1P06400 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RB1P06400 RNA5SP38-201ENST00000410750 119 ntBASIC3.35□□□□□ -1.87
RB1P06400 RNU6-55P-201ENST00000411092 107 ntBASIC3.35□□□□□ -1.87
RB1P06400 RNU6-954P-201ENST00000411355 107 ntBASIC3.35□□□□□ -1.87
RB1P06400 DPPA2P1-201ENST00000428060 556 ntBASIC3.35□□□□□ -1.87
RB1P06400 AC022018.1-201ENST00000430685 241 ntBASIC3.35□□□□□ -1.87
RB1P06400 MTCO2P16-201ENST00000436962 677 ntBASIC3.35□□□□□ -1.87
RB1P06400 AL022238.1-201ENST00000442557 355 ntBASIC3.35□□□□□ -1.87
RB1P06400 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.35□□□□□ -1.87
RB1P06400 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.35□□□□□ -1.87
RB1P06400 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.35□□□□□ -1.87
RB1P06400 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RB1P06400 AL033528.1-201ENST00000453780 140 ntBASIC3.35□□□□□ -1.87
RB1P06400 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.35□□□□□ -1.87
RB1P06400 snoU109.1-201ENST00000459339 135 ntBASIC3.35□□□□□ -1.87
RB1P06400 SNORD42A-201ENST00000459584 64 ntBASIC3.35□□□□□ -1.87
RB1P06400 MTND1P3-201ENST00000484956 952 ntBASIC3.35□□□□□ -1.87
RB1P06400 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.35□□□□□ -1.87
RB1P06400 AC010587.1-201ENST00000505809 469 ntBASIC3.35□□□□□ -1.87
RB1P06400 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.35□□□□□ -1.87
RB1P06400 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.35□□□□□ -1.87
RB1P06400 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.35□□□□□ -1.87
RB1P06400 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.35□□□□□ -1.87
RB1P06400 GTF3AP2-201ENST00000557014 266 ntBASIC3.35□□□□□ -1.87
RB1P06400 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.35□□□□□ -1.87
RB1P06400 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.35□□□□□ -1.87
RB1P06400 AC010653.1-201ENST00000571108 881 ntBASIC3.35□□□□□ -1.87
RB1P06400 AC073544.2-201ENST00000601155 540 ntBASIC3.35□□□□□ -1.87
RB1P06400 AL451064.1-201ENST00000607718 471 ntBASIC3.35□□□□□ -1.87
RB1P06400 AC008250.2-201ENST00000615261 205 ntBASIC3.35□□□□□ -1.87
RB1P06400 OR5H6-203ENST00000642105 978 ntBASIC3.35□□□□□ -1.87
RB1P06400 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RB1P06400 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.35□□□□□ -1.87
RB1P06400 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RB1P06400 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RB1P06400 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.35□□□□□ -1.87
RB1P06400 AC233263.6-201ENST00000631132 1963 ntBASIC3.34□□□□□ -1.87
RB1P06400 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RB1P06400 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
RB1P06400 RNU6-511P-201ENST00000363496 107 ntBASIC3.34□□□□□ -1.87
RB1P06400 SNORA54-201ENST00000384281 123 ntBASIC3.34□□□□□ -1.87
RB1P06400 MIR184-201ENST00000384962 84 ntBASIC3.34□□□□□ -1.87
RB1P06400 SEPT2P1-201ENST00000419651 180 ntBASIC3.34□□□□□ -1.87
RB1P06400 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.34□□□□□ -1.87
RB1P06400 AL589872.1-201ENST00000426602 288 ntBASIC3.34□□□□□ -1.87
RB1P06400 RPL23AP82-202ENST00000427528 469 ntBASIC3.34□□□□□ -1.87
RB1P06400 AC119618.1-201ENST00000434191 222 ntBASIC3.34□□□□□ -1.87
RB1P06400 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.34□□□□□ -1.87
RB1P06400 AP000936.2-201ENST00000447151 681 ntBASIC3.34□□□□□ -1.87
RB1P06400 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.34□□□□□ -1.87
RB1P06400 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.34□□□□□ -1.87
RB1P06400 CENPBD1P1-201ENST00000464061 469 ntBASIC3.34□□□□□ -1.87
RB1P06400 MTCO2P29-201ENST00000465212 189 ntBASIC3.34□□□□□ -1.87
RB1P06400 RBM43P1-201ENST00000476891 1081 ntBASIC3.34□□□□□ -1.87
RB1P06400 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.34□□□□□ -1.87
RB1P06400 AC006445.2-201ENST00000510061 472 ntBASIC3.34□□□□□ -1.87
RB1P06400 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.34□□□□□ -1.87
RB1P06400 RNA5SP367-201ENST00000516557 118 ntBASIC3.34□□□□□ -1.87
RB1P06400 RNA5SP337-201ENST00000517007 109 ntBASIC3.34□□□□□ -1.87
RB1P06400 AP002453.2-201ENST00000533503 320 ntBASIC3.34□□□□□ -1.87
RB1P06400 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.34□□□□□ -1.87
RB1P06400 AP005136.1-201ENST00000579765 429 ntBASIC3.34□□□□□ -1.87
RB1P06400 MIR3945-201ENST00000581853 98 ntBASIC3.34□□□□□ -1.87
RB1P06400 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.34□□□□□ -1.87
RB1P06400 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.34□□□□□ -1.87
RB1P06400 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms