Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 RPEP3-201ENST00000425462 676 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 MTCO1P39-201ENST00000426148 480 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 AC004938.1-201ENST00000438468 308 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 SSXP4-201ENST00000451349 245 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 RPL23AP65-201ENST00000475608 468 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 RN7SL441P-201ENST00000492388 296 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 AC015795.1-201ENST00000513669 327 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 AL358913.1-201ENST00000554342 121 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 MIR4308-201ENST00000580634 81 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 PRPF19P1-201ENST00000584766 898 ntBASIC5.65□□□□□ -1.5
ALDH1A1P00352 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.65□□□□□ -1.5
ALDH1A1P00352 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.65□□□□□ -1.51
ALDH1A1P00352 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ALDH1A1P00352 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
ALDH1A1P00352 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
ALDH1A1P00352 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
ALDH1A1P00352 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.65□□□□□ -1.51
ALDH1A1P00352 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.65□□□□□ -1.51
ALDH1A1P00352 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
ALDH1A1P00352 BTBD10P1-201ENST00000549824 1352 ntBASIC5.65□□□□□ -1.51
ALDH1A1P00352 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
ALDH1A1P00352 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ALDH1A1P00352 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
ALDH1A1P00352 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.64□□□□□ -1.51
ALDH1A1P00352 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.64□□□□□ -1.51
ALDH1A1P00352 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ALDH1A1P00352 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ALDH1A1P00352 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ALDH1A1P00352 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.64□□□□□ -1.51
ALDH1A1P00352 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
ALDH1A1P00352 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ALDH1A1P00352 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.64□□□□□ -1.51
ALDH1A1P00352 Y_RNA.261-201ENST00000364631 102 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 RNU6-817P-201ENST00000391083 104 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 U3.30-201ENST00000391308 210 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 RPL26P6-201ENST00000440913 438 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 RPL37P6-202ENST00000464216 403 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 YWHAEP4-201ENST00000505390 198 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 RNY3P16-201ENST00000516338 101 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ALDH1A1P00352 AC106785.1-201ENST00000565935 262 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 MIR4659A-201ENST00000580269 81 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 RPL7P50-201ENST00000600588 727 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 MIR8076-201ENST00000611401 83 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.64□□□□□ -1.51
ALDH1A1P00352 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.64□□□□□ -1.51
ALDH1A1P00352 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.64□□□□□ -1.51
ALDH1A1P00352 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ALDH1A1P00352 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
ALDH1A1P00352 AC100821.1-201ENST00000523153 2479 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 AL606537.1-201ENST00000607258 2011 ntBASIC5.64□□□□□ -1.51
ALDH1A1P00352 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ALDH1A1P00352 SAGE4P-201ENST00000442271 3381 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
ALDH1A1P00352 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ALDH1A1P00352 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
ALDH1A1P00352 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ALDH1A1P00352 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ALDH1A1P00352 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 MIR92A2-201ENST00000385299 75 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 SNORA12.2-201ENST00000391040 156 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 RNU2-21P-201ENST00000410368 188 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 AL353621.1-201ENST00000418219 243 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 COX6CP13-201ENST00000428703 226 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 U8.22-201ENST00000459141 133 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 RNU6-953P-201ENST00000459154 107 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 RN7SKP210-201ENST00000459176 261 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 RPL30P1-201ENST00000488676 339 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 RNU6-390P-201ENST00000516259 103 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 SNORA72.7-201ENST00000516349 94 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 Y_RNA.719-201ENST00000517156 106 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 AC022726.1-201ENST00000587475 207 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 BRDTP1-201ENST00000605735 677 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 AC011476.5-201ENST00000615594 130 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 MIR6864-201ENST00000617935 70 ntBASIC5.63□□□□□ -1.51
ALDH1A1P00352 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
ALDH1A1P00352 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
ALDH1A1P00352 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms