Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL359073.1-201ENST00000448036 403 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 RPL23AP62-201ENST00000463396 453 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 RPL12P20-201ENST00000475538 479 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 AC020890.1-201ENST00000491837 504 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.16□□□□□ -1.74
CNOT4O95628 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.16□□□□□ -1.74
CNOT4O95628 RNU6-1069P-201ENST00000516612 133 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.16□□□□□ -1.74
CNOT4O95628 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.16□□□□□ -1.74
CNOT4O95628 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.16□□□□□ -1.74
CNOT4O95628 CYCSP40-201ENST00000575927 294 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 RN7SL652P-201ENST00000577769 300 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.16□□□□□ -1.74
CNOT4O95628 MIR4715-201ENST00000584117 79 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CNOT4O95628 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.16□□□□□ -1.74
CNOT4O95628 NUTF2P8-201ENST00000604593 363 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 AL590392.1-201ENST00000604960 446 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 AL670379.4-201ENST00000605279 254 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 PRR13P7-201ENST00000605538 430 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.16□□□□□ -1.74
CNOT4O95628 AL589994.2-201ENST00000621124 579 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.16□□□□□ -1.74
CNOT4O95628 MIR6830-201ENST00000636015 70 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.16□□□□□ -1.74
CNOT4O95628 ZNF137P-201ENST00000456718 1920 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 AC027290.2-201ENST00000623210 18662 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CNOT4O95628 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
CNOT4O95628 AC007256.1-201ENST00000392253 2765 ntBASIC4.16□□□□□ -1.74
CNOT4O95628 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.16□□□□□ -1.74
CNOT4O95628 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CNOT4O95628 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNOT4O95628 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CNOT4O95628 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CNOT4O95628 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CNOT4O95628 AC116667.1-201ENST00000604855 2072 ntBASIC4.15□□□□□ -1.74
CNOT4O95628 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CNOT4O95628 SNORA71.2-201ENST00000364941 134 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNOT4O95628 SET-203ENST00000372688 801 ntTSL 2 BASIC4.15□□□□□ -1.75
CNOT4O95628 SNORA70F-201ENST00000384142 135 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 Y_RNA.455-201ENST00000384230 98 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 Y_RNA.574-201ENST00000384766 95 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CNOT4O95628 SNORA16.2-201ENST00000390991 127 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.15□□□□□ -1.75
CNOT4O95628 RNU2-43P-201ENST00000410306 190 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 RNU6-1050P-201ENST00000410388 107 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 RNU4-65P-201ENST00000410473 140 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 RAC1P3-201ENST00000416129 580 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.15□□□□□ -1.75
CNOT4O95628 CKS1BP6-201ENST00000424932 240 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 AC093151.1-201ENST00000427711 313 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 RPL23AP69-201ENST00000431134 458 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 AC004938.1-201ENST00000438468 308 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.15□□□□□ -1.75
CNOT4O95628 GSTA11P-201ENST00000452866 669 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 AC007967.1-201ENST00000455422 1159 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 RNU7-167P-201ENST00000459160 62 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 AC104472.2-201ENST00000469035 601 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 VN1R104P-201ENST00000505115 1009 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.15□□□□□ -1.75
CNOT4O95628 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.15□□□□□ -1.75
CNOT4O95628 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.15□□□□□ -1.75
CNOT4O95628 AC026782.1-201ENST00000512952 449 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.15□□□□□ -1.75
CNOT4O95628 RN7SKP122-201ENST00000515923 296 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 SNORA14.1-201ENST00000516113 141 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 RNU1-54P-201ENST00000517181 120 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CNOT4O95628 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.15□□□□□ -1.75
CNOT4O95628 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.15□□□□□ -1.75
CNOT4O95628 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.15□□□□□ -1.75
CNOT4O95628 MYL12BP1-201ENST00000569826 507 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.15□□□□□ -1.75
CNOT4O95628 AL355810.1-201ENST00000614629 552 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.15□□□□□ -1.75
CNOT4O95628 AL732372.2-225ENST00000642124 456 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNOT4O95628 MFSD8-242ENST00000641690 4199 ntBASIC4.15□□□□□ -1.75
CNOT4O95628 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.15□□□□□ -1.75
CNOT4O95628 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNOT4O95628 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.14□□□□□ -1.75
CNOT4O95628 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.14□□□□□ -1.75
CNOT4O95628 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.14□□□□□ -1.75
CNOT4O95628 AC092435.4-201ENST00000623012 4159 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.14□□□□□ -1.75
CNOT4O95628 RNU1-94P-201ENST00000362627 173 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 RNA5SP479-201ENST00000364858 117 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CNOT4O95628 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNOT4O95628 Y_RNA.404-201ENST00000383978 102 ntBASIC4.14□□□□□ -1.75
CNOT4O95628 RNU6-393P-201ENST00000384475 107 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms