Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 ART2BP-201ENST00000453501 499 ntBASIC3□□□□□ -1.93
SIX3O95343 AC091179.1-201ENST00000461606 579 ntBASIC3□□□□□ -1.93
SIX3O95343 RPL7P5-201ENST00000471472 736 ntBASIC3□□□□□ -1.93
SIX3O95343 AP000797.1-201ENST00000478870 387 ntBASIC3□□□□□ -1.93
SIX3O95343 RPS27P26-201ENST00000494583 239 ntBASIC3□□□□□ -1.93
SIX3O95343 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3□□□□□ -1.93
SIX3O95343 AC005178.1-201ENST00000508392 440 ntBASIC3□□□□□ -1.93
SIX3O95343 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3□□□□□ -1.93
SIX3O95343 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3□□□□□ -1.93
SIX3O95343 AC128657.1-201ENST00000549459 145 ntBASIC3□□□□□ -1.93
SIX3O95343 ZNF519P3-201ENST00000557158 1032 ntBASIC3□□□□□ -1.93
SIX3O95343 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3□□□□□ -1.93
SIX3O95343 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3□□□□□ -1.93
SIX3O95343 MIR4293-201ENST00000584305 78 ntBASIC3□□□□□ -1.93
SIX3O95343 ABBA01006766.1-201ENST00000584728 294 ntBASIC3□□□□□ -1.93
SIX3O95343 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3□□□□□ -1.93
SIX3O95343 AL035413.2-201ENST00000604801 525 ntBASIC3□□□□□ -1.93
SIX3O95343 FTX_3.1-201ENST00000610451 147 ntBASIC3□□□□□ -1.93
SIX3O95343 AC008498.1-201ENST00000613012 531 ntBASIC3□□□□□ -1.93
SIX3O95343 AC138932.5-201ENST00000617759 563 ntBASIC3□□□□□ -1.93
SIX3O95343 AL589994.2-201ENST00000621124 579 ntBASIC3□□□□□ -1.93
SIX3O95343 AC091931.1-201ENST00000623488 728 ntBASIC3□□□□□ -1.93
SIX3O95343 API5P2-201ENST00000397055 1498 ntBASIC3□□□□□ -1.93
SIX3O95343 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3□□□□□ -1.93
SIX3O95343 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3□□□□□ -1.93
SIX3O95343 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SIX3O95343 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3□□□□□ -1.93
SIX3O95343 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SIX3O95343 AC010733.2-201ENST00000589496 5702 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.99□□□□□ -1.93
SIX3O95343 AL353743.1-202ENST00000431724 1695 ntBASIC2.99□□□□□ -1.93
SIX3O95343 MTND5P29-201ENST00000458676 1807 ntBASIC2.99□□□□□ -1.93
SIX3O95343 Y_RNA.169-201ENST00000363745 96 ntBASIC2.99□□□□□ -1.93
SIX3O95343 SNORA7.4-201ENST00000384249 137 ntBASIC2.99□□□□□ -1.93
SIX3O95343 RNU5A-2P-201ENST00000384337 116 ntBASIC2.99□□□□□ -1.93
SIX3O95343 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.99□□□□□ -1.93
SIX3O95343 RNU6-193P-201ENST00000410977 107 ntBASIC2.99□□□□□ -1.93
SIX3O95343 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.99□□□□□ -1.93
SIX3O95343 HMGN2P30-201ENST00000423237 256 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AL365203.2-201ENST00000423444 196 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC009969.1-201ENST00000438726 172 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC093156.1-201ENST00000440382 670 ntBASIC2.99□□□□□ -1.93
SIX3O95343 RPL23AP58-201ENST00000440453 469 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.99□□□□□ -1.93
SIX3O95343 UBE2D3P4-201ENST00000441973 436 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC009296.1-201ENST00000443146 155 ntBASIC2.99□□□□□ -1.93
SIX3O95343 NEFMP1-201ENST00000443423 1006 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC016696.1-201ENST00000446949 318 ntBASIC2.99□□□□□ -1.93
SIX3O95343 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.99□□□□□ -1.93
SIX3O95343 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX3O95343 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX3O95343 UBL5P3-201ENST00000475112 231 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC105252.1-201ENST00000503089 286 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC097462.2-201ENST00000504623 481 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.99□□□□□ -1.93
SIX3O95343 MTND1P22-201ENST00000510572 951 ntBASIC2.99□□□□□ -1.93
SIX3O95343 RNU6-143P-201ENST00000516942 93 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC011979.2-201ENST00000527568 352 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX3O95343 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX3O95343 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX3O95343 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.99□□□□□ -1.93
SIX3O95343 AC083760.1-201ENST00000589621 670 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC008739.2-201ENST00000597006 317 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.99□□□□□ -1.93
SIX3O95343 AL670379.6-201ENST00000603753 252 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AL670379.11-201ENST00000604059 253 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC008162.1-201ENST00000604718 254 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AL670379.1-201ENST00000604752 252 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AL670379.5-201ENST00000605253 252 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AL670379.12-201ENST00000605291 253 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AL670379.8-201ENST00000605353 252 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC004805.2-201ENST00000605382 482 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AL670379.7-201ENST00000605823 252 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC108747.1-201ENST00000609508 535 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AL360219.1-201ENST00000610230 366 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AL603755.1-201ENST00000619504 163 ntBASIC2.99□□□□□ -1.93
SIX3O95343 UCA1.1-201ENST00000620952 75 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC018692.3-201ENST00000623929 123 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC007494.3-201ENST00000624660 743 ntBASIC2.99□□□□□ -1.93
SIX3O95343 AC092104.1-201ENST00000497346 1441 ntBASIC2.99□□□□□ -1.93
SIX3O95343 MTND5P7-201ENST00000413558 1798 ntBASIC2.99□□□□□ -1.93
SIX3O95343 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SIX3O95343 AC010680.1-201ENST00000590024 3590 ntBASIC2.99□□□□□ -1.93
SIX3O95343 UBE2L2-201ENST00000254302 429 ntBASIC2.98□□□□□ -1.93
SIX3O95343 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SIX3O95343 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.98□□□□□ -1.93
SIX3O95343 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SIX3O95343 AC073325.2-201ENST00000339545 159 ntBASIC2.98□□□□□ -1.93
SIX3O95343 RNU6-553P-201ENST00000364047 96 ntBASIC2.98□□□□□ -1.93
SIX3O95343 SNORD15B-201ENST00000384714 146 ntBASIC2.98□□□□□ -1.93
SIX3O95343 AL031577.2-201ENST00000404133 280 ntBASIC2.98□□□□□ -1.93
SIX3O95343 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
SIX3O95343 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SIX3O95343 RNU4-72P-201ENST00000410754 173 ntBASIC2.98□□□□□ -1.93
SIX3O95343 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.98□□□□□ -1.93
SIX3O95343 AL139413.1-201ENST00000421309 217 ntBASIC2.98□□□□□ -1.93
SIX3O95343 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.98□□□□□ -1.93
SIX3O95343 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.98□□□□□ -1.93
SIX3O95343 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms