Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 RNU1-19P-201ENST00000363306 165 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 SNORD115-32-201ENST00000364079 82 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 RNU6-1180P-201ENST00000364935 107 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 Y_RNA.558-201ENST00000384685 113 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 RNA5SP241-201ENST00000391326 114 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 U3.36-201ENST00000408418 213 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AL031736.2-201ENST00000426573 787 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AC005476.1-201ENST00000554427 397 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 OR4H12P-201ENST00000556269 907 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 MIR3691-201ENST00000578066 90 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 RN7SL290P-201ENST00000578661 300 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AL139395.1-201ENST00000603662 160 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AC069294.1-201ENST00000608397 350 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 RPSAP73-201ENST00000614820 330 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AL161629.2-201ENST00000615347 275 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AC025521.1-201ENST00000621624 286 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AC140134.1-201ENST00000511830 3544 ntBASIC6.83□□□□□ -1.32
TRIM35Q9UPQ4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 RNU6-384P-201ENST00000364900 104 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 RNU1-74P-201ENST00000384108 171 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 SPTLC1P2-201ENST00000407089 121 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 snoU109.4-201ENST00000458953 143 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 RN7SL808P-201ENST00000496066 299 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 SNORD33.1-201ENST00000516213 88 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 RNA5SP165-201ENST00000517142 115 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 GSTP1P1-201ENST00000548078 319 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 MIR3646-201ENST00000578301 84 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 MIR3121-201ENST00000579680 77 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 MIR3145-201ENST00000580727 82 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 RN7SL708P-201ENST00000580952 299 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 AC109446.4-201ENST00000623235 2755 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 ABCC13-202ENST00000463099 3842 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 LINC01109-201ENST00000603837 3081 ntBASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.82□□□□□ -1.32
TRIM35Q9UPQ4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 AF127577.6-201ENST00000623352 2191 ntBASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 RNU6-235P-201ENST00000362644 107 ntBASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 SNORD116-21-201ENST00000384507 92 ntBASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 RNU4-34P-201ENST00000410431 124 ntBASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 RPL30P3-201ENST00000424262 333 ntBASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 PSMD10P3-201ENST00000437000 448 ntBASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 RPL7L1P1-201ENST00000448259 785 ntBASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 RPL23AP75-201ENST00000491601 451 ntBASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 RNU6-1315P-201ENST00000517187 99 ntBASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 AL391261.3-201ENST00000557194 520 ntBASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 MIR1273C-201ENST00000578669 77 ntBASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM35Q9UPQ4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms