Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.89□□□□□ -1.95
HPS4Q9NQG7 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.88□□□□□ -1.95
HPS4Q9NQG7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
HPS4Q9NQG7 SNORD21-201ENST00000383953 95 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AL513477.1-202ENST00000417061 214 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 UBE2FP3-201ENST00000436366 524 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.88□□□□□ -1.95
HPS4Q9NQG7 RNU6-420P-201ENST00000458780 107 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 RPS20P20-201ENST00000460498 340 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AL135752.1-201ENST00000479477 471 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 LTV1P1-201ENST00000510683 1237 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 MTCO1P47-201ENST00000523889 1271 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AP004247.1-201ENST00000531556 1289 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AC013828.2-201ENST00000532487 235 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AC068587.4-201ENST00000533893 186 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AC090888.2-201ENST00000559765 1144 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 RPL23AP84-201ENST00000571193 464 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.88□□□□□ -1.95
HPS4Q9NQG7 MIR3945-201ENST00000581853 98 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AC083760.1-201ENST00000589621 670 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 BCRP9-201ENST00000605312 388 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 Z99289.3-201ENST00000605586 594 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AC103710.4-201ENST00000609301 899 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AL355493.4-201ENST00000618530 292 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 AP000676.3-201ENST00000623299 569 ntBASIC2.88□□□□□ -1.95
HPS4Q9NQG7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HPS4Q9NQG7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HPS4Q9NQG7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.88□□□□□ -1.95
HPS4Q9NQG7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 RNU6-223P-201ENST00000362830 107 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 U3.12-201ENST00000364498 214 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 RNU6-769P-201ENST00000384407 104 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 RNU6-253P-201ENST00000384730 105 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 MIR196B-201ENST00000384852 84 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 MIR627-201ENST00000384979 97 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 MIR9-1-201ENST00000385198 89 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 HMGN2P35-201ENST00000412164 270 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 UBE2FP1-201ENST00000416536 447 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 SPA17P1-201ENST00000416656 452 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 ARL5AP4-201ENST00000430731 512 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AL606662.1-201ENST00000445763 553 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AP000936.2-201ENST00000447151 681 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 OR6C5P-201ENST00000452388 923 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 RPS15AP36-201ENST00000492022 382 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 RNU6-1282P-201ENST00000516735 96 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AC026407.1-201ENST00000518369 204 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AP003461.1-201ENST00000528866 78 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AC079089.3-201ENST00000603094 673 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AC021755.4-201ENST00000616620 456 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AC112204.3-201ENST00000623822 332 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 AC110079.1-202ENST00000635213 138 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 OR5H6-203ENST00000642105 978 ntBASIC2.87□□□□□ -1.95
HPS4Q9NQG7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.87□□□□□ -1.95
HPS4Q9NQG7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 Y_RNA.18-201ENST00000362461 102 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 RNU6-859P-201ENST00000362728 107 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 RNU6-270P-201ENST00000364131 105 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 Y_RNA.302-201ENST00000364997 102 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AL445529.1-201ENST00000398713 389 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 TXNP7-201ENST00000406296 293 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 RNA5SP21-201ENST00000410917 96 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 HMGB1P11-201ENST00000413899 637 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AC005005.2-201ENST00000420779 380 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 GSTA11P-201ENST00000452866 669 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AP1S2P1-201ENST00000457344 379 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 RPL23AP11-201ENST00000475260 469 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 RAC1P5-201ENST00000512182 576 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 RNA5SP76-201ENST00000516277 87 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 RNU6-928P-201ENST00000516876 104 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 RN7SKP40-201ENST00000517211 242 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 NRON-201ENST00000517270 370 ntBASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.86□□□□□ -1.95
HPS4Q9NQG7 AMZ2P1-203ENST00000565833 850 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms