Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RPL21P8-201ENST00000465083 535 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AC097473.1-201ENST00000508142 408 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 MTND4LP22-201ENST00000508209 276 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 SNORA25.10-201ENST00000515926 124 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 RNU6-273P-201ENST00000516937 96 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AC090115.3-201ENST00000553218 849 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 CYP4A43P-201ENST00000568156 121 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 U4.1-201ENST00000620349 87 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 PLCE1P1-201ENST00000622094 305 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 MAPK10-286ENST00000641208 8747 ntBASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.53□□□□□ -1.68
BCAS3Q9H6U6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
BCAS3Q9H6U6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 RNU6-1252P-201ENST00000363054 104 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 Y_RNA.149-201ENST00000363558 117 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 SNORD35B-201ENST00000363660 87 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 RNU6-188P-201ENST00000364207 107 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 RNU6-1318P-201ENST00000365389 103 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 MIR513A2-201ENST00000385249 127 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 PTMAP2-201ENST00000397627 327 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 Y_RNA.646-201ENST00000410980 101 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 NUP35P1-201ENST00000422734 947 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 RAC1P6-201ENST00000423911 575 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 GOT2P5-201ENST00000433995 546 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AL500522.2-201ENST00000448562 343 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 SCARNA18-201ENST00000459004 134 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 IGLVIV-53-201ENST00000520107 367 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 DEFB108D-201ENST00000527787 222 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC023442.1-201ENST00000531247 422 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 YPEL5P3-201ENST00000547227 352 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 MIR5685-201ENST00000579080 79 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC008521.1-201ENST00000587471 187 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AL355812.1-201ENST00000603215 216 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC024220.1-201ENST00000603675 484 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AL451044.1-201ENST00000604867 238 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC091167.4-201ENST00000605079 184 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC012603.1-201ENST00000606424 528 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AL121772.2-201ENST00000614331 297 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 FAM157A-202ENST00000615155 405 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AL354798.1-201ENST00000622505 329 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 Z69720.2-201ENST00000624755 279 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AL669831.3-213ENST00000636676 183 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC139713.2-215ENST00000641428 5037 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 SAGE2P-201ENST00000420011 2126 ntBASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
BCAS3Q9H6U6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 Y_RNA.80-201ENST00000362996 102 ntBASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 RNA5SP399-201ENST00000364003 117 ntBASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 RNU6-637P-201ENST00000384050 107 ntBASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 RNU6-432P-201ENST00000384196 109 ntBASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 MIR30B-201ENST00000384850 88 ntBASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 CISD1P1-201ENST00000393907 327 ntBASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 AL391417.1-201ENST00000404100 426 ntBASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BCAS3Q9H6U6 AL162388.1-201ENST00000450912 352 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms