Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 SEPT14P3-201ENST00000439401 183 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AL732372.2-207ENST00000445840 183 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 HMGB3P8-201ENST00000449709 577 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 SEPT14P2-201ENST00000453405 183 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 RBMY2UP-201ENST00000453474 324 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AC103851.1-201ENST00000506833 274 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 PCBP2P3-201ENST00000509726 843 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 SEPT14P4-201ENST00000513445 186 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 RNU6-1045P-201ENST00000516321 107 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 Vault.3-201ENST00000516676 95 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 RNU7-30P-201ENST00000516835 62 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 FO082796.1-201ENST00000523795 183 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AC023050.3-201ENST00000541142 333 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AC011611.1-201ENST00000552179 197 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 MIR3671-201ENST00000580455 88 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AC006077.1-201ENST00000604746 343 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AL596245.1-201ENST00000618994 362 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 MIR1302-1-201ENST00000637932 143 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AC100810.6-201ENST00000638068 285 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 AC073073.2-201ENST00000609827 2578 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 CEP170P1-201ENST00000502249 4587 ntBASIC3.69□□□□□ -1.82
EBF3Q9H4W6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
EBF3Q9H4W6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 RPL7P26-201ENST00000333817 754 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 RNU6-74P-201ENST00000384235 107 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC004987.3-201ENST00000413879 771 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 MTCO3P12-201ENST00000416718 547 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 RPS15AP40-201ENST00000419621 391 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC019097.1-201ENST00000424783 735 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AL353729.1-201ENST00000425044 720 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AL353777.1-201ENST00000425552 326 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC008065.1-201ENST00000428525 348 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC016691.1-201ENST00000441321 413 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 TXNP1-201ENST00000441872 371 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 CBWD4P-201ENST00000445695 655 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 HMGB1P15-201ENST00000453854 435 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC087385.1-201ENST00000475062 312 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 FTH1P9-201ENST00000513251 355 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 RNA5SP401-201ENST00000515920 127 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 SNORA40.12-201ENST00000516329 111 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC107953.1-201ENST00000522216 297 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC020661.2-201ENST00000560114 134 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 MIR3118-1-201ENST00000581787 76 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC007566.2-201ENST00000603642 413 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC011468.4-201ENST00000603942 409 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC010680.4-201ENST00000605334 543 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
EBF3Q9H4W6 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.68□□□□□ -1.82
EBF3Q9H4W6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 Y_RNA.157-201ENST00000363638 102 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 Y_RNA.184-201ENST00000363884 108 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 RNU6-853P-201ENST00000364306 107 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 RNU6-283P-201ENST00000364788 107 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.67□□□□□ -1.82
EBF3Q9H4W6 Y_RNA.474-201ENST00000384341 102 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 RNU6-456P-201ENST00000384493 107 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 SNORA75.4-201ENST00000391278 119 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 AL162578.1-201ENST00000406202 378 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 RNA5SP120-201ENST00000410900 112 ntBASIC3.67□□□□□ -1.82
EBF3Q9H4W6 MRPL50P2-201ENST00000416821 482 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms