Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-1301P-201ENST00000362724 104 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU4-80P-201ENST00000363200 141 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU1-59P-201ENST00000364829 162 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNA5SP455-201ENST00000365190 119 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-1316P-201ENST00000384242 108 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-31P-201ENST00000384388 108 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 SNORA24.1-201ENST00000384401 135 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-393P-201ENST00000384475 107 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.528-201ENST00000384575 108 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-1184P-201ENST00000384588 108 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 MIR142-201ENST00000384835 87 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-466P-201ENST00000391224 103 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AL109941.1-201ENST00000401925 229 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 EIF4A1P3-201ENST00000411521 244 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC092634.6-201ENST00000418558 192 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AP001324.1-201ENST00000428553 399 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL36AP6-201ENST00000435770 321 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RPS11P7-201ENST00000442125 465 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 HIGD1AP2-201ENST00000446367 280 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL39P29-201ENST00000447779 157 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU7-87P-201ENST00000459343 62 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 snoU13.29-201ENST00000459370 104 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNA5SP57-201ENST00000459463 123 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC006511.1-201ENST00000470614 315 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RPS26P21-201ENST00000475397 348 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AP000926.1-201ENST00000479573 241 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL21P103-201ENST00000479921 488 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AL161747.1-201ENST00000480068 358 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC090255.1-201ENST00000495779 349 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RN7SL591P-201ENST00000496150 292 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 SCARNA8-201ENST00000515924 131 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-871P-201ENST00000516122 100 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-162P-201ENST00000516228 103 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.690-201ENST00000516603 95 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-453P-201ENST00000516819 85 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.722-201ENST00000517279 114 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 COX6CP8-201ENST00000522620 226 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 HMGN2P6-201ENST00000551091 273 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC022217.4-201ENST00000604389 163 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC015813.4-201ENST00000610469 179 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AL627230.6-201ENST00000611129 280 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 U1.25-201ENST00000614085 162 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC004852.3-201ENST00000614131 326 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC004467.1-201ENST00000615678 330 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC068831.7-201ENST00000616954 363 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 U1.34-201ENST00000618578 162 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AL445567.2-201ENST00000618935 498 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 U1.31-201ENST00000620022 160 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 MIR6730-201ENST00000622213 67 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC091953.3-201ENST00000623220 236 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF204P-201ENST00000416749 2397 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms