Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 MTND2P32-201ENST00000521584 1038 ntBASIC3.99□□□□□ -1.77
CHMP4AQ9BY43 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.99□□□□□ -1.77
CHMP4AQ9BY43 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.99□□□□□ -1.77
CHMP4AQ9BY43 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.99□□□□□ -1.77
CHMP4AQ9BY43 OR10AB1P-201ENST00000609613 938 ntBASIC3.99□□□□□ -1.77
CHMP4AQ9BY43 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.99□□□□□ -1.77
CHMP4AQ9BY43 AC026422.1-201ENST00000623961 452 ntBASIC3.99□□□□□ -1.77
CHMP4AQ9BY43 MIR7515-201ENST00000637837 67 ntBASIC3.99□□□□□ -1.77
CHMP4AQ9BY43 AC010889.1-201ENST00000566193 2666 ntBASIC3.99□□□□□ -1.77
CHMP4AQ9BY43 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.99□□□□□ -1.77
CHMP4AQ9BY43 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 AC000403.1-201ENST00000613696 3585 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 SNORA71.1-201ENST00000364523 117 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 RNU6-851P-201ENST00000384565 107 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 SDCBPP3-201ENST00000419629 891 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 AC233279.1-201ENST00000455300 423 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 RPS29P2-201ENST00000479278 136 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 AC091951.3-201ENST00000504093 246 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 RPF2P2-201ENST00000504693 896 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 RNA5SP165-201ENST00000517142 115 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 AC104027.1-201ENST00000521887 300 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 UBL5P2-201ENST00000583788 219 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 MIR3117-201ENST00000584034 78 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 MIR4293-201ENST00000584305 78 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 AL391813.1-201ENST00000603098 260 ntBASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHMP4AQ9BY43 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 SNORA72.3-201ENST00000365074 132 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 SNORA48.5-201ENST00000391143 135 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 RNU2-49P-201ENST00000410666 184 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 ELOCP17-201ENST00000414751 326 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 RPS24P7-201ENST00000416921 246 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 RPL22P18-201ENST00000417197 377 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 AL354941.1-201ENST00000438600 464 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 SNORA64.4-201ENST00000516632 81 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 RNU6-143P-201ENST00000516942 93 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 RN7SKP272-201ENST00000516988 232 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 RNU6-1003P-201ENST00000517099 105 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 AC093732.2-201ENST00000607950 274 ntBASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.97□□□□□ -1.77
CHMP4AQ9BY43 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.96□□□□□ -1.77
CHMP4AQ9BY43 MIR22-201ENST00000362190 85 ntBASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 RNU4-28P-201ENST00000364739 141 ntBASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 HMGN2P35-201ENST00000412164 270 ntBASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 RPL36AP53-201ENST00000432891 316 ntBASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 TIMM9P1-201ENST00000436122 256 ntBASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 RN7SL432P-201ENST00000484057 298 ntBASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 AC098591.2-201ENST00000510152 315 ntBASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 RNU6-201P-201ENST00000517100 61 ntBASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 AC025588.2-201ENST00000604851 466 ntBASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 uc_338.14-201ENST00000613162 166 ntBASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 AL162274.2-201ENST00000614406 332 ntBASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHMP4AQ9BY43 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AL353743.1-202ENST00000431724 1695 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 MIR887-201ENST00000401258 79 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AL356057.2-201ENST00000403318 432 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 RNA5SP274-201ENST00000410484 108 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 RPS12P18-201ENST00000442381 270 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AL606517.1-201ENST00000446914 387 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 EEF1B2P7-201ENST00000451177 676 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 CECR9-201ENST00000453421 199 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 RN7SL442P-201ENST00000473804 320 ntBASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CHMP4AQ9BY43 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms