Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4□□□□□ -1.77
NDC1Q9BTX1 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NDC1Q9BTX1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NDC1Q9BTX1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
NDC1Q9BTX1 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4□□□□□ -1.77
NDC1Q9BTX1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
NDC1Q9BTX1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 SPRR2C-201ENST00000290702 219 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 RNU6-254P-201ENST00000363377 107 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 RHOT1P2-201ENST00000366423 333 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 RNU1-13P-201ENST00000384499 162 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 RNU6-1127P-201ENST00000384580 107 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 EIF4E2P1-201ENST00000393781 255 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 RPL21P112-201ENST00000434403 463 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 HSFY6P-201ENST00000445573 403 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 RPS15AP27-201ENST00000449183 343 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 SNORD108-201ENST00000459332 71 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AC104164.2-201ENST00000496953 495 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 SLC25A15P5-201ENST00000508033 253 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 RPL39P5-202ENST00000512505 151 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AC093303.1-201ENST00000514549 295 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 RNU6-685P-201ENST00000517088 95 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 RNA5SP454-201ENST00000517231 127 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AC008489.1-201ENST00000524271 483 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AC093227.2-201ENST00000589357 285 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AC174048.1-201ENST00000603389 144 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AC022893.3-201ENST00000607665 437 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AC131238.1-201ENST00000617135 328 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 AL353748.2-201ENST00000622148 471 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 RNA5SP196-201ENST00000625967 102 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 BMS1P21-201ENST00000634565 365 ntBASIC3.99□□□□□ -1.77
NDC1Q9BTX1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NDC1Q9BTX1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 Y_RNA.146-201ENST00000363549 102 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 Y_RNA.395-201ENST00000383945 109 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 MIR93-201ENST00000385024 80 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 MIR134-201ENST00000385258 73 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC244098.2-201ENST00000422068 99 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 FABP5P14-201ENST00000437273 393 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 NEFMP1-201ENST00000443423 1006 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AL359073.1-201ENST00000448036 403 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 MRPS31P2-201ENST00000451581 518 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 RNA5SP246-201ENST00000458909 119 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 RN7SL604P-201ENST00000492589 296 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 VN1R104P-201ENST00000505115 1009 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 RNU6-189P-201ENST00000516120 101 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 COPS8P3-201ENST00000526024 482 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AP006587.4-201ENST00000526053 529 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 RN7SL600P-201ENST00000581811 299 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC016925.2-201ENST00000605108 242 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC012409.4-201ENST00000612923 249 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC008121.3-201ENST00000618726 433 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC103705.1-201ENST00000619013 241 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 AC015967.1-201ENST00000619893 476 ntBASIC3.98□□□□□ -1.77
NDC1Q9BTX1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms