Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 Y_RNA.533-201ENST00000384596 114 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 AL589765.3-201ENST00000446084 462 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 AC073587.1-201ENST00000447093 876 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 PRELID3BP1-201ENST00000457142 540 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 LINC01399-202ENST00000458450 244 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 AC133134.1-201ENST00000466800 359 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 RPL7P5-201ENST00000471472 736 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 MED28P2-201ENST00000475771 317 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 HSPE1P6-201ENST00000479457 291 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 SNORA81.3-201ENST00000517283 198 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 AC022080.3-201ENST00000544433 482 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
IFT43Q96FT9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 AL158827.2-201ENST00000602494 330 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 AC009779.6-201ENST00000603972 165 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 AP005432.2-201ENST00000608162 586 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 BX005214.3-202ENST00000619809 325 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 AL691447.3-201ENST00000635020 330 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
IFT43Q96FT9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT43Q96FT9 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT43Q96FT9 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT43Q96FT9 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT43Q96FT9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT43Q96FT9 RPL9P7-201ENST00000330965 580 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 RN7SKP104-201ENST00000362605 328 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 Y_RNA.183-201ENST00000363882 113 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 RNU6-512P-201ENST00000364438 103 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 RNU6-1074P-201ENST00000383995 104 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 Y_RNA.471-201ENST00000384312 102 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 U3.42-201ENST00000408746 214 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 RNU2-71P-201ENST00000411395 189 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 AL096701.2-201ENST00000416920 238 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 AL513043.1-201ENST00000439124 535 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 RPL9P9-202ENST00000466501 579 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 HMGN1P11-201ENST00000508668 303 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 RNA5SP471-201ENST00000516971 106 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 AC109329.1-201ENST00000518744 317 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 SNORD84-203ENST00000584275 78 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 AL355877.2-201ENST00000603670 358 ntBASIC5.13□□□□□ -1.59
IFT43Q96FT9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
IFT43Q96FT9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT43Q96FT9 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
IFT43Q96FT9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT43Q96FT9 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
IFT43Q96FT9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
IFT43Q96FT9 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
IFT43Q96FT9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
IFT43Q96FT9 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
IFT43Q96FT9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
IFT43Q96FT9 ZNF299P-201ENST00000406845 1804 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 RNU6-395P-201ENST00000365662 106 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 SNORA66-201ENST00000384792 133 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 MIR628-201ENST00000385229 95 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
IFT43Q96FT9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 AC007098.1-201ENST00000420122 367 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 AC092423.1-201ENST00000430165 186 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 AC004383.1-201ENST00000438135 289 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
IFT43Q96FT9 AL354714.3-201ENST00000447284 493 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 AC009963.2-201ENST00000453431 138 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 RPS29P22-201ENST00000472363 168 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 RN7SL441P-201ENST00000492388 296 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 AL157871.3-201ENST00000557231 293 ntBASIC5.12□□□□□ -1.59
IFT43Q96FT9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.12□□□□□ -1.59
IFT43Q96FT9 RN7SL52P-201ENST00000584271 284 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms